Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2798 ATGAAGCTCCTCGAAAAGGATTTCGAAGCAAACCAAACGGGGACTGCGAAGATCATTCCAGAAGAACCGGATGACCTGTGGCTTCTCTACAACCTCATCAACCCTGGAGACTACGTCACCGCCGACACCACCCGCAAGGTTCACCTCGAACAAACCAAGAGCACTGCGTCACGTGTCAGGCTCTCCCTCAACCTCAAGGTCACGTGCTGCGACTTCCACAAGGACTCCTCAACCCTCCGCGTCCATGGCCGCAACCTCGACGCAAACCAGTACGTCGCCTCGGGCTCATTCCACACTCTCACCCTCGAGAGGAACAAGCCCTTCGAGCTTCGCAAGAAGCTCTGGAACGACGATGCCGTTGAAGCGTTGCGTGAAGCAACGGAGAACGACGCTTCGTGTTGTGAGGCTGAACTCGCCGTGGTGATCCTGCATGAGCAGCATGCGGAGATATACTTGATAGGAAAAGGGGTCACCGCGATGGTTTCAAGGGTTGAAGCTTCTTCTGCTGCGCGTCGTGGGGATGGTGGTGGATCTTCTGGGAACGTGTTTTTTCGTGAGGTTTTTGGGGGTTTTGTGAAGCACGTGGATTTGAACAAGGCTAAGAGTGTTGTCATTGCGAGTGGTGATTCGAGAAAAGATGAGTTTCGTAGGTTTATGATGTCGGAAGCGAAGAGGATGAGGATGAGGTCGATAGAAGAGAACAAAGGGAGGATCGTGGTTGCGGGGTTTGGGGGAAAGGGTGATCTGAGGGAGGTTTTGGGCGAGGGCACTGTGATGAACTTGATGAAGGACAGCAAGGTTGGGTTGGAGATTAGGGCTTTGAGGGAGTTGTGGGACATGGTGTCAAGCAACTCGGATCGTGCTTGTTATGGTCCAAAGAATGTGGAGAGTGCGCATGAGATGAGGGCCATTGAGACCCTTTTGATCACGGATGATCTTTATAGGAGCGATGAGATTGGGACCAGGAAGAGGTATGCTGGTTTGGTGAAGTCGGTGAAGGAGTCTGGGGGGAAGGCTTTGGTGTATTCTTCCATGCATGTCATGGCACATCAGCTTCAACAGCTCACCGGTGTAGCAGCCATTCTGAGGTTTCCCTTGCCTGATCTCGAAGAAGATATGGATGTTTAG 1128 0.5239 MKLLEKDFEANQTGTAKIIPEEPDDLWLLYNLINPGDYVTADTTRKVHLEQTKSTASRVRLSLNLKVTCCDFHKDSSTLRVHGRNLDANQYVASGSFHTLTLERNKPFELRKKLWNDDAVEALREATENDASCCEAELAVVILHEQHAEIYLIGKGVTAMVSRVEASSAARRGDGGGSSGNVFFREVFGGFVKHVDLNKAKSVVIASGDSRKDEFRRFMMSEAKRMRMRSIEENKGRIVVAGFGGKGDLREVLGEGTVMNLMKDSKVGLEIRALRELWDMVSSNSDRACYGPKNVESAHEMRAIETLLITDDLYRSDEIGTRKRYAGLVKSVKESGGKALVYSSMHVMAHQLQQLTGVAAILRFPLPDLEEDMDV* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2798 375 Gene3D eRF1 domain 2 136 262 IPR042226 -
Dod01g2798 375 PANTHER EUKARYOTIC RELEASE FACTOR 1 (ERF1) FAMILY PROTEIN 1 373 - -
Dod01g2798 375 SUPERFAMILY Dom34/Pelota N-terminal domain-like 1 127 IPR038069 -
Dod01g2798 375 Pfam eRF1 domain 3 270 366 IPR005142 -
Dod01g2798 375 SMART eRF1_1_2 1 128 IPR005140 -
Dod01g2798 375 Gene3D - 264 375 IPR029064 -
Dod01g2798 375 TIGRFAM pelota: mRNA surveillance protein pelota 1 366 IPR004405 GO:0070481|GO:0070966|GO:0071025
Dod01g2798 375 Pfam eRF1 domain 1 1 126 IPR005140 -
Dod01g2798 375 Gene3D Pelota, domain A 1 129 IPR038069 -
Dod01g2798 375 PANTHER PELOTA 1 373 IPR004405 GO:0070481|GO:0070966|GO:0071025
Dod01g2798 375 Pfam eRF1 domain 2 138 264 IPR005141 -
Dod01g2798 375 SUPERFAMILY Translational machinery components 135 266 - -
Dod01g2798 375 SUPERFAMILY L30e-like 270 371 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2798 Dod-Chr1 68110053 68111614 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2798 K06965 - gmx:100803618 443.351