Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2781 ATGGTGAAGGCGTACCTCCGATACGAGCCGGCGGCGTCGTTCGGCGTGATCGCCTCCGTGGACTCCAACATCGCCTACGACAGCTCCGGCAAGCACCTCCTCTCTCCCGCGCTCGAGAAGATCGCCGTCTGGCACGTCCGCCAAGGAATCTGCACCAAAACCCTAACCCCTTCCCCTGCCTCTCGCGGCCCCTCCCTCGCCGTCACCTCCATCGCCCCCTCCCCTTCCTCCTCCCTGGTAGCTGCTGGTTATGCTGACGGTAGTATTAGGATTTGGGACTCTGATGCGGGAACGTGCGAGACCACTTTGAATGGACACAAGGGAGCTGTCACTGCTCTTCGTTACAACAAGGCGGCGTCCTTGCTCGCTTCCGGAAGCAAGGACAATGATGTCATTTTGTGGGATGTCGTTGGCGAGGCAGGCCTCTTTCGCCTTCGCGGCCACCGCGACCAGGTGACTGATGTTGTTTTTGTGGGGTCTGGGAAAAAGCTGGTTAGTTCCTCTAAGGACAAGTTTTTGAGAGTGTGGGATCTTGATACCCAGCACTGTATGCAAATTGTTGGTGGCCATCATAGTGAAATTTGGTCTGTAGACATTGATCCGGATGAAAGGTACCTTGTCACTGGTTCTGCGGACAACGAGCTTCGGTTTTATTCAATTAAGCATGAGTCTGTGGATGGGCAGCCTGTAAATGTGGACAATGCAGTGGTTGGCAGTGGGGATTCTTCCGTTCAAGACAAATGGGAAGTTTTGAGGCAGTTTGGCGAGATTCAGAGGCAAAGCAAGGATAGAGTTGCCATGGTACAGTTCAATAATTCGGGGAATTTGCTAGCTTGTCAAGTTGCAGGAAAGACTGTGGAAATATACCGCGTGTTGGATGAAGCTGAAGCGAAGCGTAAAGCAAAACGCAGGGTTCACCGCAGGAAAGAGAAGAAGCATGGCAAAGAGGCTCCAGAGGGAACTGAAAATGGAAACAGGGATAATGAGGACAAAGGAGGTAAGTCTTCTGGGACTAATGGACCCATTGAAGCAAGTAACCCTGCAGTTACCGTGCCTGATGTGTTTAAGCTGCTGCATACTCTTAGAGCTAGCAAAAAGATATGCTCCATATCTTTCTGCCCTGTCACTCCGAAGAATTCACTTGCTAGTTTAGCACTGTCCTTGAACAATAATCTACTTGAGTTTTACTCCATTGGAAGTGGCGAATCCACAAAATCTCTTGCTATTGAGCTTCAAGGGCACCGTTCTGATGTTAGAAGTGTGACACTTAGTTCGGATAACACTCTTCTGATGTCAACCAGTCACAATGCGGTAAAGATTTGGAACCCTAGTACCGGGTCATGCCTAAGGACAATTGATTCTGGGTATGGACTGTGCAGTTTAATTCTCCCCTCTAACAAGTATGGGCTTGTTGGAACTAAAGAGGGAACCTTAGAAATTATTGACATTGGAAGTGGTGCTCGCCTTGAAGCAGTGGAAGCTCATGGTGCTTCTGTTCATTCAATTGCTGCCCTACCAGATAAAAATGGTTTTGTCACGGGAAGTGCTGATCATGATGTTAAGTTCTGGCAGTACCAAATAAAGCAAAACCCCGGCCAAGCTCCTAAGCAACTCAGTGTGTCAAATATCAGTACTATGAAGATGAATGATGATGTTCTTGTGGTTGCAATTAGCCCTGATGCTAAATATATTGCTGTTGCACTGTTGGATAGTACTGTGAAGGTTCACTTTGCAGATACATTCAAATTCTTCCTGTCGTTATATGGCCACAAACTGCCTGTTCTTTGTATGGATATATCATCAGATGGAGATCTAATTGTGACTGGCTCAGCAGATAAAAATATGAAGATTTGGGGTTTGGATTTTGGTGACTGTCATAAATCCATTTTTGCACATGCTGACAGTGTTATGGCAGTGCGATTTGTTCCAAAGACACACTATGTGTTTAGTGTTGGAAAAGATCGCCTAGTTAAATATTGGGACGCTGATAAATTTGAGTTGCTGTTAACTCTTGAAGGACATCATGCAGATGTCTGGTGTCTTGCAATCAGTAATCGTGGTGATTTTATTGTCACTGGATCTCATGACCGTTCTATCCGCCGCTGGGATCGTACTGAAGAGCAGTTTTTCATTGAGGAAGAAAAGGAGAAAAGGTTGGAGGAAATGTTTGAGGCTGACCTTGATAATGCGTTTGAAAATAAGTATGCACCAAAAGAAGAGATACCGGAGGAGGGAGCTGTGGCTTTAGCTGGGAAAAAAACCCAGGAAACCCTCACTGCAACTGACTTAATTATTGAGAGATTAGACATAGCAGAAGCTGAAAAAAAACGTATTGCTGAACATCAGGAGGAGAGAAATAACAAAAATGTTGCTGCTTTCCAAGCAAATCTGCTTATGAATGGTCTTTCCCCTTCTGATTATGTTCTAAGTGCATTTTCAGATGTTCACTCCAATGATCTTGAGCAAACACTATTGGCTTTACCATTTTCAGATGCTTTGATGCTTCTGTCATACTTGAAAGATTGGACTTCATATTCTGATAAGGTTGAGCTTGTTTGCCGAATAGGAACAGTACTGTTGCAGACACATTACAACCAGCTGCTTACCACGCCAGCTGCCAGACCTATCTTGACTGTTTTCGATGACGTCTTTTATGAACGTGTCAAGGAATGGAAAGACATCTTTGGTTTTAACCTTGCAGCCATGGATCATATCCAGCAAATGATGGCTTCGAGATCAGATGCTGTTTTTCGTGATGCAAGATCTAAACTGCTAGAGATTCGTGCTAAACAATCAAAACGTTTAGCAGAAAGATCTGATCCTGGAGAAGGGAAGAGGAAGAAGAAGAAGAAGACATAA 2859 0.4533 MVKAYLRYEPAASFGVIASVDSNIAYDSSGKHLLSPALEKIAVWHVRQGICTKTLTPSPASRGPSLAVTSIAPSPSSSLVAAGYADGSIRIWDSDAGTCETTLNGHKGAVTALRYNKAASLLASGSKDNDVILWDVVGEAGLFRLRGHRDQVTDVVFVGSGKKLVSSSKDKFLRVWDLDTQHCMQIVGGHHSEIWSVDIDPDERYLVTGSADNELRFYSIKHESVDGQPVNVDNAVVGSGDSSVQDKWEVLRQFGEIQRQSKDRVAMVQFNNSGNLLACQVAGKTVEIYRVLDEAEAKRKAKRRVHRRKEKKHGKEAPEGTENGNRDNEDKGGKSSGTNGPIEASNPAVTVPDVFKLLHTLRASKKICSISFCPVTPKNSLASLALSLNNNLLEFYSIGSGESTKSLAIELQGHRSDVRSVTLSSDNTLLMSTSHNAVKIWNPSTGSCLRTIDSGYGLCSLILPSNKYGLVGTKEGTLEIIDIGSGARLEAVEAHGASVHSIAALPDKNGFVTGSADHDVKFWQYQIKQNPGQAPKQLSVSNISTMKMNDDVLVVAISPDAKYIAVALLDSTVKVHFADTFKFFLSLYGHKLPVLCMDISSDGDLIVTGSADKNMKIWGLDFGDCHKSIFAHADSVMAVRFVPKTHYVFSVGKDRLVKYWDADKFELLLTLEGHHADVWCLAISNRGDFIVTGSHDRSIRRWDRTEEQFFIEEEKEKRLEEMFEADLDNAFENKYAPKEEIPEEGAVALAGKKTQETLTATDLIIERLDIAEAEKKRIAEHQEERNNKNVAAFQANLLMNGLSPSDYVLSAFSDVHSNDLEQTLLALPFSDALMLLSYLKDWTSYSDKVELVCRIGTVLLQTHYNQLLTTPAARPILTVFDDVFYERVKEWKDIFGFNLAAMDHIQQMMASRSDAVFRDARSKLLEIRAKQSKRLAERSDPGEGKRKKKKKT* 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2781 952 MobiDBLite consensus disorder prediction 299 346 - -
Dod01g2781 952 PANTHER WD REPEAT CONTAINING PROTEIN 3 WDR3 1 950 - -
Dod01g2781 952 ProSiteProfiles Trp-Asp (WD) repeats profile. 629 670 IPR001680 GO:0005515
Dod01g2781 952 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 103 136 - -
Dod01g2781 952 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 187 221 - -
Dod01g2781 952 ProSiteProfiles Trp-Asp (WD) repeats profile. 671 703 IPR001680 GO:0005515
Dod01g2781 952 Pfam Dip2/Utp12 Family 806 906 IPR007148 -
Dod01g2781 952 ProSiteProfiles Trp-Asp (WD) repeats profile. 411 451 IPR001680 GO:0005515
Dod01g2781 952 Pfam WD domain, G-beta repeat 585 618 IPR001680 GO:0005515
Dod01g2781 952 Pfam WD domain, G-beta repeat 62 93 IPR001680 GO:0005515
Dod01g2781 952 Pfam WD domain, G-beta repeat 666 703 IPR001680 GO:0005515
Dod01g2781 952 Pfam WD domain, G-beta repeat 97 135 IPR001680 GO:0005515
Dod01g2781 952 Pfam WD domain, G-beta repeat 182 218 IPR001680 GO:0005515
Dod01g2781 952 Pfam WD domain, G-beta repeat 144 177 IPR001680 GO:0005515
Dod01g2781 952 Pfam WD domain, G-beta repeat 493 523 IPR001680 GO:0005515
Dod01g2781 952 Pfam WD domain, G-beta repeat 410 442 IPR001680 GO:0005515
Dod01g2781 952 SUPERFAMILY WD40 repeat-like 24 399 IPR036322 GO:0005515
Dod01g2781 952 SUPERFAMILY Nucleoporin domain 359 708 - -
Dod01g2781 952 CDD WD40 24 290 - -
Dod01g2781 952 MobiDBLite consensus disorder prediction 930 952 - -
Dod01g2781 952 Gene3D - 454 654 IPR015943 GO:0005515
Dod01g2781 952 Coils Coil 292 312 - -
Dod01g2781 952 Gene3D - 352 453 IPR015943 GO:0005515
Dod01g2781 952 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 492 524 - -
Dod01g2781 952 SMART WD40_4 247 290 IPR001680 GO:0005515
Dod01g2781 952 SMART WD40_4 622 661 IPR001680 GO:0005515
Dod01g2781 952 SMART WD40_4 485 524 IPR001680 GO:0005515
Dod01g2781 952 SMART WD40_4 48 93 IPR001680 GO:0005515
Dod01g2781 952 SMART WD40_4 580 619 IPR001680 GO:0005515
Dod01g2781 952 SMART WD40_4 539 577 IPR001680 GO:0005515
Dod01g2781 952 SMART WD40_4 445 482 IPR001680 GO:0005515
Dod01g2781 952 SMART WD40_4 180 219 IPR001680 GO:0005515
Dod01g2781 952 SMART WD40_4 96 135 IPR001680 GO:0005515
Dod01g2781 952 SMART WD40_4 664 703 IPR001680 GO:0005515
Dod01g2781 952 SMART WD40_4 404 442 IPR001680 GO:0005515
Dod01g2781 952 SMART WD40_4 138 177 IPR001680 GO:0005515
Dod01g2781 952 MobiDBLite consensus disorder prediction 930 944 - -
Dod01g2781 952 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 61 93 - -
Dod01g2781 952 ProSiteProfiles Trp-Asp (WD) repeats profile. 145 186 IPR001680 GO:0005515
Dod01g2781 952 Gene3D - 135 309 IPR015943 GO:0005515
Dod01g2781 952 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 587 621 - -
Dod01g2781 952 Gene3D - 657 719 IPR015943 GO:0005515
Dod01g2781 952 Gene3D - 16 134 IPR015943 GO:0005515
Dod01g2781 952 ProSiteProfiles Trp-Asp (WD) repeats profile. 187 221 IPR001680 GO:0005515
Dod01g2781 952 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 145 180 - -
Dod01g2781 952 ProSitePatterns Trp-Asp (WD) repeats signature. 164 178 IPR019775 -
Dod01g2781 952 Coils Coil 771 791 - -
Dod01g2781 952 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 629 661 - -
Dod01g2781 952 ProSiteProfiles Trp-Asp (WD) repeats profile. 103 136 IPR001680 GO:0005515
Dod01g2781 952 ProSiteProfiles Trp-Asp (WD) repeats profile. 61 102 IPR001680 GO:0005515
Dod01g2781 952 ProSiteProfiles Trp-Asp (WD) repeats profile. 587 628 IPR001680 GO:0005515
Dod01g2781 952 ProSitePatterns Trp-Asp (WD) repeats signature. 122 136 IPR019775 -
Dod01g2781 952 PRINTS G protein beta WD-40 repeat signature 606 620 IPR020472 -
Dod01g2781 952 PRINTS G protein beta WD-40 repeat signature 122 136 IPR020472 -
Dod01g2781 952 PRINTS G protein beta WD-40 repeat signature 164 178 IPR020472 -
Dod01g2781 952 PANTHER WD REPEAT-CONTAINING PROTEIN 3 1 950 - -
Dod01g2781 952 CDD WD40 407 703 - -
Dod01g2781 952 ProSiteProfiles Trp-Asp (WD) repeats profile. 492 524 IPR001680 GO:0005515
Dod01g2781 952 MobiDBLite consensus disorder prediction 312 333 - -
Dod01g2781 952 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 671 703 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2781 584 712 Miscellaneous Gene Families AT5G08390 27.907 6.36e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2781 K14556 - gmx:100775810 1624.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2781 01 67688664 67695933 Dod01g2781 01 67688664 67695933 ECH