Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2780 ATGTCTGGCCCTGTGGCCATTGTTGATGATTTGGATGGAGAAGCAATCTCTTGTGCAGAGAGAACTAAATCTCTTGATGCCATTTCTGAAATAGACCACTTATCTGTATTGACAAATGGCGAAGCTGATCATTCCTCTGAAATTGTTGGTTTCAGCGCTGGAGACCTCTTGCTTTCTAATGGAGAATGGTATTCCGGGTCCCTTCTTGGCAATATTCCTGAGGGCCATGGTGTCTATGTGTGGTCTAATGGTTGCGTGTATGAGGGTGAGTGGAGACAAGGGATGAGAAATGGGAATGGAAAAATAAGATGGCCTTCTGGAGCAGTCTATGAGGGCGACTTCTCCGGTGGCTATATCCATGGTACTGGAAAACGTATTGGTCCTGATAATTTGACCTATAAAGGCAGGTGGCGATTGAATCTTAAACATGGTCTTGGTTATCAAGTTTATCCTAATGGAGATGTCTTTGAAGGCTCTTGGATAAGAGGAACTCCAGAGGGGCCTGGAAAGTATACTTGGGCCAATGGAAATGTGTATTTAGGGAATATGAAAGGCGGGGCGATGTCAGGAAAGGGTACTCTTACCTGGATAACTGGGGACTCATTTGAAGGAAGCTGGCTGAATGGCATGATGCATGGGTTTGGAGTGCATACTTGGAGTGATGGGGGCTGCTATGTTGGGACTTGGGCACATGGCCTAAAAGATGGCAAAGGAACATTTTATCCAAAAGGCAGTGGTCTTCCATCTGTACAAGAAATTTATCTCAATGCCTTGAGAAAAAGAGGGCTATTGCCAGATTTGAGAAAGCAGAACCAGGTGGGAGATATCAAGGTTGGTGAGAACCGGAGATCAAGTCGTGTTTCATCTGATAAGCTTGCAAAAGGAAACCTGTTAAATCTGGAACAGTCTAGCAGGGCAAATGTTTCTCTCGAGAGGCGATGGAGTCTTGAGGTATCTATTGAGAAAGTGATTGGACATGATTCTACATTAGGTTTAACAGAATCTCTACTAGAAAGTGGAAATAAAGAGGTTAATGCAAAGATCCCAATCTTGGAAAGAGAGTACATGCAAGGCGTATTGATTAGTGAGCTAGTGTTAAATGATATGTTTGCATCGATGTCTAGAAGGGAAAGGAGACTTCAAAAAAAACTCGCCAGAGAGATAAAAAGACCTGGTGAAGCAATCATTAAAGGTCACAGGAGTTATGATCTAATGCTTAGTTTGCAACTTGGAATAAGGTATACCGTGGGCAAGATTACACCTGTGCAGAGAAGAGAAGTGCGAGCATCAGATTTTGGATCCAAAGCAAGCTTTTGGATGAATTTCCCTAAAGAAGGTTCTCAATTAACGCCACCTCATCAATCAGACGATTTTAAATGGAAAGATTACTGCCCAATGGTGTTTAGAAATTTAAGAGAGTTGTTCAAGATTGATGCTGCTGACTACATGATGTCCATTTGCGGAAATGATGCTCTGAGGGAAGTATCTTCTCCAGGGAAAAGTGGTAGTATCTTTTTCCTATCTCAGGATGATCGTTTCATGATCAAGACATTGCGAAGATCTGAAGTCAAGGTTCTTCTCAGAATGCTTCCAGACTATCATCATCATGTGAAGTCATATGAAAATACACTCATTACAAAATTTTTTGGCCTGCACAGAATTAAACCTTCAAGTGGTCAAAAGTTTCGCTTTGTTGTAATGGGAAATATGTTCTGCACAGAATTAAGAATCCATCGGAGATTTGATTTAAAAGGTTCATCCCTTGGGCGATCATCAGACAAGATAGAAATTGATGAGAATACCACTCTTAAAGATTTGGATCTGAACTACAGCTTCTACTTGGAACCATCTTGGCGAGAGTCCTTATTAAAGCAAATTCAAATAGACAGCAAGTTTTTGGAAGCACAGCACATTATGGATTACAGTCTTCTTCTTGGTGTTCATTATCGAGCTCCCCAGCATCTGCGTCCTCTCACGTCATGCAGCCAACGAAAAAGTGTTGATGGATTGGCAATGCTTGCAGAGGAAGACACTCTGGAGGATGAAGTATTCAATTATCCAGAAGGCCTTGTTCTGGTTCCGCGAGGATCAGATGACAATAGTGTTGTTGTAGGCTCGCACATTAGGGGTAGCCGGTTGCGAGCTTCATCTGCTGGTGACGAGGAGGTGGATCTACTTCTACCTGGTACAGCAAGACTCCAAATCCAGCTCGGTGTGAACATGCCATCAAGGGCAGAGCAGATTCCAGGAAAACAGGAGAAGCAAATGTTCCATGAGGTGTACGATGTTGTGCTGTACCTGGGCATCATTGACATATTGCAAGACTACAACATGACTAAGAAGATTGAACATGCTTATAAATCTCTTCAGTTTGATTCTGTGTCTATCTCGGCGGTAGACCCTATGTTCTACTCACATCGCTTCCTGGAATTTATTCAGAAAGTGTTCCCTCCAAATGCAATGTCAGGTTAA 2472 0.4256 MSGPVAIVDDLDGEAISCAERTKSLDAISEIDHLSVLTNGEADHSSEIVGFSAGDLLLSNGEWYSGSLLGNIPEGHGVYVWSNGCVYEGEWRQGMRNGNGKIRWPSGAVYEGDFSGGYIHGTGKRIGPDNLTYKGRWRLNLKHGLGYQVYPNGDVFEGSWIRGTPEGPGKYTWANGNVYLGNMKGGAMSGKGTLTWITGDSFEGSWLNGMMHGFGVHTWSDGGCYVGTWAHGLKDGKGTFYPKGSGLPSVQEIYLNALRKRGLLPDLRKQNQVGDIKVGENRRSSRVSSDKLAKGNLLNLEQSSRANVSLERRWSLEVSIEKVIGHDSTLGLTESLLESGNKEVNAKIPILEREYMQGVLISELVLNDMFASMSRRERRLQKKLAREIKRPGEAIIKGHRSYDLMLSLQLGIRYTVGKITPVQRREVRASDFGSKASFWMNFPKEGSQLTPPHQSDDFKWKDYCPMVFRNLRELFKIDAADYMMSICGNDALREVSSPGKSGSIFFLSQDDRFMIKTLRRSEVKVLLRMLPDYHHHVKSYENTLITKFFGLHRIKPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSSDKIEIDENTTLKDLDLNYSFYLEPSWRESLLKQIQIDSKFLEAQHIMDYSLLLGVHYRAPQHLRPLTSCSQRKSVDGLAMLAEEDTLEDEVFNYPEGLVLVPRGSDDNSVVVGSHIRGSRLRASSAGDEEVDLLLPGTARLQIQLGVNMPSRAEQIPGKQEKQMFHEVYDVVLYLGIIDILQDYNMTKKIEHAYKSLQFDSVSISAVDPMFYSHRFLEFIQKVFPPNAMSG* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2780 823 Gene3D - 570 816 - -
Dod01g2780 823 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 398 816 IPR002498 GO:0016307|GO:0046488
Dod01g2780 823 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 15 820 - -
Dod01g2780 823 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 15 820 IPR023610 -
Dod01g2780 823 Pfam MORN repeat 202 223 IPR003409 -
Dod01g2780 823 Pfam MORN repeat 110 130 IPR003409 -
Dod01g2780 823 Pfam MORN repeat 225 245 IPR003409 -
Dod01g2780 823 Pfam MORN repeat 87 108 IPR003409 -
Dod01g2780 823 Pfam MORN repeat 133 155 IPR003409 -
Dod01g2780 823 Pfam MORN repeat 179 200 IPR003409 -
Dod01g2780 823 Pfam MORN repeat 156 178 IPR003409 -
Dod01g2780 823 Pfam MORN repeat 64 86 IPR003409 -
Dod01g2780 823 SMART PIPK_2 428 817 IPR002498 GO:0016307|GO:0046488
Dod01g2780 823 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 175 244 - -
Dod01g2780 823 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 59 186 - -
Dod01g2780 823 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 487 814 IPR002498 GO:0016307|GO:0046488
Dod01g2780 823 SUPERFAMILY SAICAR synthase-like 397 816 - -
Dod01g2780 823 PIRSF PIP5K_plant 6 820 IPR017163 GO:0005524|GO:0016308
Dod01g2780 823 SMART morn 177 198 IPR003409 -
Dod01g2780 823 SMART morn 200 221 IPR003409 -
Dod01g2780 823 SMART morn 223 244 IPR003409 -
Dod01g2780 823 SMART morn 85 106 IPR003409 -
Dod01g2780 823 SMART morn 154 175 IPR003409 -
Dod01g2780 823 SMART morn 108 129 IPR003409 -
Dod01g2780 823 SMART morn 131 152 IPR003409 -
Dod01g2780 823 SMART morn 62 83 IPR003409 -
Dod01g2780 823 CDD PIPKc_AtPIP5K_like 401 815 - -
Dod01g2780 823 Gene3D - 158 207 - -
Dod01g2780 823 Gene3D - 208 248 - -
Dod01g2780 823 Gene3D - 61 124 - -
Dod01g2780 823 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 387 569 IPR027484 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2780 Dod-Chr1 67667620 67675704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2780 15 822 Acyl Lipid Metabolism Gene Families AT3G09920 74.106 0.0 1248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2780 K00889 - gmx:100805371 1433.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2780 01 67667620 67675704 Dod01g2780 01 67667620 67675704 ECH
Dod01g2780 01 67667620 67675704 Dod07g0130 07 1528203 1533227 PCT