Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2775 ATGGCTGCAACCTCAACATCACTGGCTTCCCAACTCTCCATTGGGCTTCGCCGCCCTTTGCCCAAGCTCGATTCTTTCACTTCTCAATCTTCCTTTTCTGCTACTCAATCCTTCTTCGATGCTGTTCACTCCAACCTACGCCTCTCCGTCTCTGCTTCCAAACCCTCTCGTCCCGTCGTCGCCATGGCCGGCACTGGCAAGTTCTTTGTTGGTGGCAATTGGAAGTGTAATGGAACAAAAGACTCCATCAGTAAGCTTGTATCTGACTTGAACAGTGCAAAATTGGAGCCTGATGTTGATGTTGTTGTTGCACCTCCCTTTGTATACATCGATCAGGTGAAAACCTCAATTACGGATAGGATTGAGATATCTGCTCAAAATTCTTGGGTGGGGAAAGGTGGTGCTTTCACCGGAGAAATCAGTGTGGAACAACTTAAAGACCTTGGATGCAAGTGGGTTATTCTTGGACATTCTGAGCGGAGACATATTATTGGAGAAAAGGATGAGTTTATAGGAAAGAAAGCTGCTTATGCTTTGAGCGAGGGTCTTGGAGTGATAGCATGCATTGGGGAGCTGTTAGAAGAAAGGGAAGCTGGGAAAACTTTTGATGTTTGTTTCCAGCAATTGAAGGCTTTTGCAGATGCGGTGCCTAGTTGGGATAATATTGTTATTGCATATGAACCTGTATGGGCGATTGGAACTGGCAAAGTGGCCACACCCCAGCAAGCTCAGGAAGTGCATGCAGCTGTTCGTGATTGGCTTAAAAAGAATGTCTCAGCTGAAGTTGCATCTAAGACCCGAATTATTTATGGAGGGTCCGTAAATGGGGGCAACAGTGCTGAGCTTGCGAAGCAAGAAGATATTGATGGGTTTCTTGTTGGTGGTGCATCATTAAAGGGTCCTGAGTTCGCTACCATCGTGAATTCAGTCACATCAAAGAAAGTCGCGGCTTGA 954 0.4623 MAATSTSLASQLSIGLRRPLPKLDSFTSQSSFSATQSFFDAVHSNLRLSVSASKPSRPVVAMAGTGKFFVGGNWKCNGTKDSISKLVSDLNSAKLEPDVDVVVAPPFVYIDQVKTSITDRIEISAQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHIIGEKDEFIGKKAAYALSEGLGVIACIGELLEEREAGKTFDVCFQQLKAFADAVPSWDNIVIAYEPVWAIGTGKVATPQQAQEVHAAVRDWLKKNVSAEVASKTRIIYGGSVNGGNSAELAKQEDIDGFLVGGASLKGPEFATIVNSVTSKKVAA* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2775 317 ProSitePatterns Triosephosphate isomerase active site. 225 235 IPR020861 GO:0004807
Dod01g2775 317 PANTHER TRIOSEPHOSPHATE ISOMERASE, CHLOROPLASTIC 1 315 - -
Dod01g2775 317 Gene3D Aldolase class I 49 316 IPR013785 -
Dod01g2775 317 Pfam Triosephosphate isomerase 69 309 IPR000652 GO:0004807
Dod01g2775 317 SUPERFAMILY Triosephosphate isomerase (TIM) 64 310 IPR035990 GO:0004807
Dod01g2775 317 ProSiteProfiles Triosephosphate isomerase (TIM) family profile. 67 309 IPR000652 GO:0004807
Dod01g2775 317 PANTHER TRIOSEPHOSPHATE ISOMERASE 1 315 IPR000652 GO:0004807
Dod01g2775 317 CDD TIM 68 308 IPR000652 GO:0004807
Dod01g2775 317 Hamap Triosephosphate isomerase [tpiA]. 66 309 IPR022896 GO:0004807|GO:0006096
Dod01g2775 317 TIGRFAM tim: triose-phosphate isomerase 69 299 IPR000652 GO:0004807
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2775 Dod-Chr1 67595358 67599633 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2775 K01803 - gmx:100819824 528.48