Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2720 ATGATGAACAGTTCTTCGAACGGCATGATGTCCCCGTCTTCATCATCGGGAGCAGCACAAACCCCTGGTCTCAAGACCTATTTCAAAACCCCCGAAGGCCGATACAAGCTTCAATACGAGAAGACTCACCCTTCTGGTCTTCTTCATTACGCTCACGGCAAAACCGTCACTCAGGTAACTCTGGCGCATCTCAAGGACAAGCCTGCGCCTTCAACACCAACTGCTTCTTCTTCGAGTTTTAGTGCCAGCAGTGGAGTACGGTCCGCAGCAGCTAGATTGTTGGGAGGAAGCAATGGAAGCCGAGCACTTAGTTTCGTTGGAGGCAATGGTAGCAGTAAGAGCAATGGAGGAACCAGCAGGATTGGTTCCATTGGTGCCTCAAGTTCAAGTAGTTCATTGGCTAATCCGAATTTTGATGGGAAAGGAACCTACTTGATCTTCAATGTCGGGGATGCCATTTTCATAAGTGATTTGAATTCTCAAGACAAGGACCCCATAAAGTCTATTCACTTCAGTAATTCGAATCCCGTGTGCCACGCATTTGATCCAGATGCCAAGGATGGGCATGATTTGCTTATTGGCTTGAACTCTGGTGATGTCTACACCGTGTCACTGAGACAGCAATTACAGGATGTTGTCAAAAAGCTTGTTGGGGCCCAGCATTACAACAAAGATGGTTCTGTCAATAACAGTCGTTGTACTTGTATTGCTTGGGTGCCAGGAGGTGATGGTGCTTTTGTTGTTGCTCATGCTGACGGGAATTTGTACGTATATGAAAAGAACAAAGATGGTGCTGGTGATTCTTCATTCCCGGTTGTCAAAGATCAAAGTCAATTTTCTGTTGCACATGCACGTTACAGTAAGAGTAATCCAATAGCCAGATGGCATATATGCCAGGGTTCAATTAACATGTTTTCTTTCTCATCTGATGGGGCATACTTAGCAACTGTTGGAAGAGATGGTTACTTACGAGTTTTTGATTACATAAAAGAACAACTTATATGTGGTGGGAAAAGTTATTATGGGGCCTTGTTATGTTGTGCTTGGAGTGCGGATGGAAAATATATTTTGACCGGGGGAGAAGATGATTTAGTTCAAGTTTGGAGCATGGATGATCGCAAGATTGTGGCATGGGGTGAGGGGCATAGCTCATGGGTAAGTGGAGTGGCTTTTGATTCGTATTGGTCATCACCTAATTCAAGTGACAATGGAGAGGCTGTCATGTATCGGTTCGGTTCTGTTGGTCAGGATACTCAATTGCTTCTATGGGACCTTGAAATGGATGAGATTGTAGTACCCTTGAGGCGTCCTCCTGGTGGATCCCCAACTTACAGTACTGGAAGCCAGTCATCCCATTGGGACAGTGTTGTCCCAGTGGGTACCTTGCAACCTGCTCCAAGCATGCGGGATGTTCCAAAAATCTCTCCATTGGTTGCTCACCGAGTGCATACCGAACCACTCTCTGGCTTGATATTTACCCAGGAATCTGTACTTACTGCCTGCCGGGAGGGGCACATAAAAATATGGACGAGACCTGGGGTTGCTGAGAGCCAATCAAGCAACTCTGAAACCTTGTTAGCTACCAGCCTTAAGGAGAAGCCTTCACTTTCAAGCAAGATCAGCAATTCTGGCTACAAACAATGA 1644 0.4592 MMNSSSNGMMSPSSSSGAAQTPGLKTYFKTPEGRYKLQYEKTHPSGLLHYAHGKTVTQVTLAHLKDKPAPSTPTASSSSFSASSGVRSAAARLLGGSNGSRALSFVGGNGSSKSNGGTSRIGSIGASSSSSSLANPNFDGKGTYLIFNVGDAIFISDLNSQDKDPIKSIHFSNSNPVCHAFDPDAKDGHDLLIGLNSGDVYTVSLRQQLQDVVKKLVGAQHYNKDGSVNNSRCTCIAWVPGGDGAFVVAHADGNLYVYEKNKDGAGDSSFPVVKDQSQFSVAHARYSKSNPIARWHICQGSINMFSFSSDGAYLATVGRDGYLRVFDYIKEQLICGGKSYYGALLCCAWSADGKYILTGGEDDLVQVWSMDDRKIVAWGEGHSSWVSGVAFDSYWSSPNSSDNGEAVMYRFGSVGQDTQLLLWDLEMDEIVVPLRRPPGGSPTYSTGSQSSHWDSVVPVGTLQPAPSMRDVPKISPLVAHRVHTEPLSGLIFTQESVLTACREGHIKIWTRPGVAESQSSNSETLLATSLKEKPSLSSKISNSGYKQ* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2720 547 PANTHER WD REPEAT PROTEIN 3 544 - -
Dod01g2720 547 SUPERFAMILY WD40 repeat-like 150 510 IPR036322 GO:0005515
Dod01g2720 547 MobiDBLite consensus disorder prediction 517 547 - -
Dod01g2720 547 SMART WD40_4 473 510 IPR001680 GO:0005515
Dod01g2720 547 SMART WD40_4 330 369 IPR001680 GO:0005515
Dod01g2720 547 SMART WD40_4 288 327 IPR001680 GO:0005515
Dod01g2720 547 SMART WD40_4 372 424 IPR001680 GO:0005515
Dod01g2720 547 SMART WD40_4 221 259 IPR001680 GO:0005515
Dod01g2720 547 MobiDBLite consensus disorder prediction 1 26 - -
Dod01g2720 547 Gene3D - 13 519 IPR015943 GO:0005515
Dod01g2720 547 ProSiteProfiles Trp-Asp (WD) repeats profile. 337 378 IPR001680 GO:0005515
Dod01g2720 547 PANTHER LOW QUALITY PROTEIN: WD REPEAT-CONTAINING PROTEIN 20-LIKE 3 544 - -
Dod01g2720 547 Pfam WD domain, G-beta repeat 300 327 IPR001680 GO:0005515
Dod01g2720 547 Pfam WD domain, G-beta repeat 344 369 IPR001680 GO:0005515
Dod01g2720 547 MobiDBLite consensus disorder prediction 107 133 - -
Dod01g2720 547 MobiDBLite consensus disorder prediction 1 23 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2720 301 431 Miscellaneous Gene Families AT5G08390 22.901 7.64e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2720 K24741 - gmx:100782580 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2720 01 66643523 66649745 Dod01g2720 01 66643523 66649745 ECH