Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2663 ATGAAGAAACAGTTGACAGGTATTCGGGGTGATTCTCCCTTACTCTCGGCAACCCGAGCCGGAAACTTAGAATTGGTACAGCAAATCATCTCTGAGAATGGGGAAGAAGAATTAAAGGAGCTGCTTTCAAACAAAAATAACTCTGGTGAAACGGCCTTATTTGTTGCTGCTGAAAATGGTCATCTTGATATAGTGAAGGAATTGATTAAATACCATGATATTGGGTTGGCCAGCTTCAAAGCTAAAAATGGATTTGATGCATTCCATATTGCTGCTAAAAATGGGAACTTGGAGATACTGAAGGTCCTCATGGAGGCCATTCCTGAAGTTTCAATGACCGTTGATCTGTCAAACACTACTGCACTGCACACTGCTGCAGCACAAGGACATATTGAGGTAGTAAATTTTCTCTTGGAAAATGGTAGCAGCCTGATAACTATTGCCAAAAGCAATGGGAAAACAGTGTTACATTCTGCTGCAAGAAATGGCCATGTGGAGGTCATCAAGTCACTTCTGAGCAGAGAATCTGAAATTGCAATGCGAATTGATAAGAAGGGGCAGACAGCACTGCATATGGCAGTCAAAGGACAAAATATTGACTTGGTGGATGAGCTTTTGAAATTGAACCCATCTTTGGTTAACATGGTGGATGCCAAGGGAAACACTGCTCTGCATATAGCAACCCGAAAGGGTCGCCTACAGATTGTTCAGAAGATACTAGATTGCAGAGAAATAGATACAGATATTGTTAATAAATCTGGCGAAACTGCTCTAGATACTGCCGAGAAAAATAGTCGCAAGGACATTGCCAACTTCCTGCAAGTTCGTGGAGCTAAAAGTGCAAAGTCCATCAAGTCGCCTGCTGCAAACTCGGCCCTTGAACTCAAACGAACAGTGAGTGACATAAAAAGTGGAGTTCATAACCAGCTGGAACACACATTTAAAACACAAAGGCGTATGCAAGGCATAGCCAAACGAATTAACAAAATGCATGCTGAGGGGCTTAACAATGCAATCAACTCCAACACTCTTGTTGCTGTCCTTATTGCAACAGTTGCTTTTGCAGCCATATTTAATGTCCCAGGCCAGTATCCCCAGAATCCCCAGAACTCAGACAACCTTGCTCCTGGAATGTCTCCTGGGGAAGTAAATATCGCTCCCAATTTCGGGTTCATGATATTCATAGTCTTTGATTCTACTGCCCTCTTCATATCATTGGCTGTTGTGGTTGTCCAAACATCCATTGTTGTTATTGAGAGGAAAGCAAAGAAACAAATGATGGCTGTTATAAATAAGTTGATGTGGTTATGCTGTGTGCTAATTTCTGTGGCTTTCCTTGCAATGTCATACATTGTTGTGGGGGAGCACAAATGGTTAGCTATAGCAGCAACAGCTATAGGAACTGTGATTATGCTAGCTACTTTAGGAACACTTTGTTACTGGGTGATTGCTCACAGACTTGAGGCCTCAAGATTGCGGAGTCTTAGGACAACAATGAGCAGTAGGCAGTCATTATCTATGTCAATGATGTCAGGTTCAGAGAGTGAGTATAAGACAGTGTACGCAATATAA 1572 0.4211 MKKQLTGIRGDSPLLSATRAGNLELVQQIISENGEEELKELLSNKNNSGETALFVAAENGHLDIVKELIKYHDIGLASFKAKNGFDAFHIAAKNGNLEILKVLMEAIPEVSMTVDLSNTTALHTAAAQGHIEVVNFLLENGSSLITIAKSNGKTVLHSAARNGHVEVIKSLLSRESEIAMRIDKKGQTALHMAVKGQNIDLVDELLKLNPSLVNMVDAKGNTALHIATRKGRLQIVQKILDCREIDTDIVNKSGETALDTAEKNSRKDIANFLQVRGAKSAKSIKSPAANSALELKRTVSDIKSGVHNQLEHTFKTQRRMQGIAKRINKMHAEGLNNAINSNTLVAVLIATVAFAAIFNVPGQYPQNPQNSDNLAPGMSPGEVNIAPNFGFMIFIVFDSTALFISLAVVVVQTSIVVIERKAKKQMMAVINKLMWLCCVLISVAFLAMSYIVVGEHKWLAIAATAIGTVIMLATLGTLCYWVIAHRLEASRLRSLRTTMSSRQSLSMSMMSGSESEYKTVYAI* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2663 523 ProSiteProfiles Ankyrin repeat region circular profile. 219 241 - -
Dod01g2663 523 ProSiteProfiles Ankyrin repeat profile. 83 115 IPR002110 GO:0005515
Dod01g2663 523 SMART ANK_2a 151 180 IPR002110 GO:0005515
Dod01g2663 523 SMART ANK_2a 48 76 IPR002110 GO:0005515
Dod01g2663 523 SMART ANK_2a 219 249 IPR002110 GO:0005515
Dod01g2663 523 SMART ANK_2a 117 147 IPR002110 GO:0005515
Dod01g2663 523 SMART ANK_2a 185 215 IPR002110 GO:0005515
Dod01g2663 523 SMART ANK_2a 83 112 IPR002110 GO:0005515
Dod01g2663 523 SMART ANK_2a 9 40 IPR002110 GO:0005515
Dod01g2663 523 SMART ANK_2a 253 282 IPR002110 GO:0005515
Dod01g2663 523 ProSiteProfiles Ankyrin repeat region circular profile. 117 144 - -
Dod01g2663 523 ProSiteProfiles Ankyrin repeat profile. 151 183 IPR002110 GO:0005515
Dod01g2663 523 SUPERFAMILY Ankyrin repeat 13 278 IPR036770 -
Dod01g2663 523 Pfam Ankyrin repeats (3 copies) 80 143 IPR002110 GO:0005515
Dod01g2663 523 Pfam Ankyrin repeats (3 copies) 9 74 IPR002110 GO:0005515
Dod01g2663 523 Pfam Ankyrin repeats (3 copies) 151 208 IPR002110 GO:0005515
Dod01g2663 523 Pfam Ankyrin repeats (3 copies) 215 274 IPR002110 GO:0005515
Dod01g2663 523 Pfam Domain of unknown function 333 452 IPR026961 -
Dod01g2663 523 ProSiteProfiles Ankyrin repeat profile. 48 70 IPR002110 GO:0005515
Dod01g2663 523 ProSiteProfiles Ankyrin repeat profile. 185 207 IPR002110 GO:0005515
Dod01g2663 523 ProSiteProfiles Ankyrin repeat profile. 117 149 IPR002110 GO:0005515
Dod01g2663 523 ProSiteProfiles Ankyrin repeat region circular profile. 185 207 - -
Dod01g2663 523 Gene3D - 107 276 IPR036770 -
Dod01g2663 523 ProSiteProfiles Ankyrin repeat region circular profile. 48 70 - -
Dod01g2663 523 ProSiteProfiles Ankyrin repeat region circular profile. 151 178 - -
Dod01g2663 523 PANTHER ANKYRIN REPEAT PLANT PROTEIN 1 523 - -
Dod01g2663 523 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 1 523 - -
Dod01g2663 523 Gene3D - 2 106 IPR036770 -
Dod01g2663 523 ProSiteProfiles Ankyrin repeat profile. 219 241 IPR002110 GO:0005515
Dod01g2663 523 ProSiteProfiles Ankyrin repeat region circular profile. 83 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2663 Dod-Chr1 66077524 66079938 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2663 1 512 Miscellaneous Gene Families AT5G60070 62.620 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2663 - - gmx:100787392 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2663 01 66077524 66079938 Dod01g2663 01 66077524 66079938 ECH