Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2660 ATGGAAGATATCTTCTGTGCTTCACAATCCTCAGCAGCCATATCCTGTAGCATTATGGATCAAGCCTCCTCTTCCTCTTGTTCCAACACCATCCAACTTGGTGGCAGAGCCATTGACCGCCACAACCCCATCATCACGGATTCTAGGAGAACCCCTTCCAGAGATTTCACTGCCTCTAGTTCTTCTTCCAAGCCACCCATTGACCCCAAACCTTGTCAAGATCTCCAAAAGGCTAAGAAAAAATCTTCTTTTTCTAAGCCTAGTGACAAGAACAAGAGAATTGCAACAAAGGGTCATCATGATCAGAAGAAGAAAAGTGTAGCAGAAAAGCTGACAGAACATATTACAAACATTTACACTTGTAAGCCAATTGATAGCATTCTGAGGAAAAGTTGGGTTAGGCCACCTGCTGATTTGGTCACTCCTGCTGGTTCTTCAAGATATTTGCTCAGTGACGCAGTTTCTTCCTTGGGCGGGGGTGTATCAGATAATGACCCAGTTTTGGCTTTAACTAAGGTTGATGATAAAAGGGCTCGAGTTGTTCATCAAGATGAGATCAACCATGCATCTAAACCCTCTAGCTCCTCTGCTCCAAAATCCGGTTCCTTAGACCAGGTTAGTTATCTCTCTAAGGTTGATGATAAAAAGGCTCAAGTTGTTCATCAACATGAAATCAACCATGCATCTAAACCCTCCAGCTCCTCTGCTCAAAAATCTGGCTCCTCAGACCAGGTTGTGGTACTGAGGGTTTCTATACACTGCAAAGGCTGTGAAGGGAAAGTGAGGAAGCATCTCTCTAGAATGCAAGGAGTAACGTCCTTCAACATAGACTCTGCTGCAAAGAAGGTAACAGTAGTTGGCGATGTGACTCCATTGAGCGTATTGGCAAGCATATCAAAGGTGAAGACTGCTCGAACTTGGCCACCATCTGCCTCAGCATTTGGATCTGGTACGGCATAA 960 0.4458 MEDIFCASQSSAAISCSIMDQASSSSCSNTIQLGGRAIDRHNPIITDSRRTPSRDFTASSSSSKPPIDPKPCQDLQKAKKKSSFSKPSDKNKRIATKGHHDQKKKSVAEKLTEHITNIYTCKPIDSILRKSWVRPPADLVTPAGSSRYLLSDAVSSLGGGVSDNDPVLALTKVDDKRARVVHQDEINHASKPSSSSAPKSGSLDQVSYLSKVDDKKAQVVHQHEINHASKPSSSSAQKSGSSDQVVVLRVSIHCKGCEGKVRKHLSRMQGVTSFNIDSAAKKVTVVGDVTPLSVLASISKVKTARTWPPSASAFGSGTA* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2660 319 PANTHER OS08G0405700 PROTEIN 209 318 IPR044526 -
Dod01g2660 319 PANTHER COPPER CHAPERONE 209 318 - -
Dod01g2660 319 MobiDBLite consensus disorder prediction 187 204 - -
Dod01g2660 319 CDD HMA 247 300 IPR006121 GO:0046872
Dod01g2660 319 ProSiteProfiles Heavy-metal-associated domain profile. 244 301 IPR006121 GO:0046872
Dod01g2660 319 PANTHER COPPER CHAPERONE 3 209 - -
Dod01g2660 319 SUPERFAMILY HMA, heavy metal-associated domain 244 301 IPR036163 GO:0046872
Dod01g2660 319 PANTHER OS08G0405700 PROTEIN 3 209 IPR044526 -
Dod01g2660 319 MobiDBLite consensus disorder prediction 225 240 - -
Dod01g2660 319 MobiDBLite consensus disorder prediction 219 240 - -
Dod01g2660 319 MobiDBLite consensus disorder prediction 49 67 - -
Dod01g2660 319 MobiDBLite consensus disorder prediction 38 108 - -
Dod01g2660 319 Pfam Heavy-metal-associated domain 248 299 IPR006121 GO:0046872
Dod01g2660 319 Gene3D - 242 304 - -
Dod01g2660 319 MobiDBLite consensus disorder prediction 73 108 - -
Dod01g2660 319 MobiDBLite consensus disorder prediction 185 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2660 Dod-Chr1 66047151 66049656 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2660 - - gmx:100810015 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2660 01 66047151 66049656 Dod07g0799 07 11382910 11384541 PCT