Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2656 ATGTTCCCGCTCGCCACTCCCACTCGGGCCTCTCCCATGGACTCTCTGCGCCACGCTCACCAATCCCTCCACCTCTCGTCACTCAATCCCCACCGTCCATCATTCCCCAAGCCCTTATCCTCATCCTCCCTCTCCTTCAGGTCCCTTCCACTTTCACCGCCGCAACAATTCCCTTCTTATTCGTCATCGTCGTTTAAGTCCTCATCCATCCGAGCCTCCTCCCAAAACGACCCCACGTTTCGCGAACCCCAACAAAACGACACCCTCCTCTCCCGCCTCCTCCAAACCCTAAAACCCCTCCTCTCCCCCGCCGTCGAAACCACCTGCATCGTTGTCGCCGCCACCGCATTCTTCTTCATGCGCCTCCACCACAACCCCGTCATCGCCGCCCCCCTCTCCCCACCCACCGCCACCGTCGACTCCTCCTCCACCACCGCCGCAGCACCCGACGTTCCGAACGAAGAACAAGAGAGAGAAATCGAAGCGCGATTGAGCAACAACCCCAACGACACCGAAGCGCTCCGCACTCTGATGGAGCTGAAAATCAAGGCGCGCAAGATCCACGAAGCGATTCAGGTCTTAGACAGGCTAATCGAGCTCGAGCCCGAGGAGTTCGAGTGGCCACTCCTGAAGGCTCACATGCACGTCTACAACGACGAGATTGAGCTCGCACGGAACGTGTTCGAAGAAATTCTCAAGAAGGACCCGCTCCGAGTTGAAGCCTACCATGGCCTCGCCATGGCAACTTCGGAATCGAAGGAGCCGATGAAGGGTTTGATGAAGAGGATCGAGGACGCGACGGACCAGTGCAAGAGGCAGAAGAAGGATTCGGAGGTGAGGGACTTCAAGCTTTTGATCGCGCAGATTAAGGTGATGGAGGGAGAGTTCAACGAGGCACTGAAGGCTTACCAGGAGCTCGTGAAGGAGGAACCAAGAGATTTCAGGCCTTATTTGTGTCAGGGTATTATATACACGTTGCTGAGGAAGAAAGATGAGGCTGAGAAGCAGTTCGAGAAGTTTCGGAGGCTTGTTCCAAAGAACCATCCTTACAAAGAGTATTTCGAGGAGAACATGTTTGCCACAAAGTTTTTCTCACAGAAGGTTGAGAGGGAAGGAGCAGGTGCTAGGGGCTGA 1134 0.5547 MFPLATPTRASPMDSLRHAHQSLHLSSLNPHRPSFPKPLSSSSLSFRSLPLSPPQQFPSYSSSSFKSSSIRASSQNDPTFREPQQNDTLLSRLLQTLKPLLSPAVETTCIVVAATAFFFMRLHHNPVIAAPLSPPTATVDSSSTTAAAPDVPNEEQEREIEARLSNNPNDTEALRTLMELKIKARKIHEAIQVLDRLIELEPEEFEWPLLKAHMHVYNDEIELARNVFEEILKKDPLRVEAYHGLAMATSESKEPMKGLMKRIEDATDQCKRQKKDSEVRDFKLLIAQIKVMEGEFNEALKAYQELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPKNHPYKEYFEENMFATKFFSQKVEREGAGARG* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2656 377 MobiDBLite consensus disorder prediction 135 165 - -
Dod01g2656 377 SUPERFAMILY TPR-like 168 348 IPR011990 GO:0005515
Dod01g2656 377 MobiDBLite consensus disorder prediction 55 83 - -
Dod01g2656 377 Coils Coil 256 276 - -
Dod01g2656 377 ProSiteProfiles TPR repeat profile. 171 204 IPR019734 GO:0005515
Dod01g2656 377 Gene3D Tetratricopeptide repeat domain 139 358 IPR011990 GO:0005515
Dod01g2656 377 Coils Coil 289 309 - -
Dod01g2656 377 SMART tpr_5 280 313 IPR019734 GO:0005515
Dod01g2656 377 SMART tpr_5 171 204 IPR019734 GO:0005515
Dod01g2656 377 SMART tpr_5 314 347 IPR019734 GO:0005515
Dod01g2656 377 Pfam Tetratricopeptide repeat 284 312 IPR019734 GO:0005515
Dod01g2656 377 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 20 370 - -
Dod01g2656 377 MobiDBLite consensus disorder prediction 135 150 - -
Dod01g2656 377 ProSiteProfiles TPR repeat profile. 280 313 IPR019734 GO:0005515
Dod01g2656 377 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 20 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2656 Dod-Chr1 66007379 66008838 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2656 - - gmx:102661172 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2656 01 66007379 66008838 Dod07g0797 07 11334775 11340260 PCT