Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2652 ATGGCCATAGCAGCCAGCATCTCTCTTCCTCTCACATCCCCCACGCGCCGCTCTCTCACGTCCACCAACCTCCTTCGCCCTTCTTCTTCTTCTTCTTCCAAATCCGTCTTGGCCACTCCTCAACGCTTTCTCAAATACCCTAACTCACGCATCATCGCTTCTTCCATGAGCATCGATGCTCCGGTGAAAACCTGCTCCTCTTCATTCCTCGACCGCAAGGAGACCGGCTTCCTCCACTTCGCCAAGTTCCACGGCCTCGGAAACGACTTCGTTTTGATTGATAATAGAGACTCTTCGGACCCAAAGATCAGTGCAGAGAAAGCGGTTGAGCTATGTGACCGTAACTTTGGTGTTGGTGCTGATGGAGTTATCTTTGTGCTGCCTGGCATCAACGGCACTGACTATACCATGAGGATTTTCAACTCTGATGGTAGTGAACCAGAGATGTGTGGCAATGGAGTGCGGTGCTTCGCCAAATTCGTTGCTCAGCTTGAGAATTTACATGGCAGGCATAGTTTTAATGTGCATACTGGTGCTGGGCTGATTGTTCCTGATATCTTTGAGGATGGAAATGTCAGAGTTGATATGGGAGAACCAATTCTCAAAGCATCAGATGTGCCTACTAAATTACCTCCAAATAAGCATGGTGCTATTGTTAACTCAGAGCTAGATGTAGATGGAGTTATCTGGAATGTCACTTGTGTCAGCATGGGAAATCCACACTGTGTAACTTTCAGCAATAAAGGAAGCCAGAATTTGGTTGTTGATGAATTGAAGCTAGCAGAAGTTGGCCCGAAATTTGAACATCATGAGGTGTTCCCTGCACGAACTAACACAGAGTTTGTGCAAGTTCTGTCTAATTCTCACCTGAAGATGCGTGTTTGGGAGCGCGGAGCAGGAGCAACTCTAGCCTGTGGAACTGGAGCTTGTGCTACAGTCGTTGCAGCAGTTCTTGAGGGTCGTGCTGGGAGGAATTGCACGGTTGATCTACCTGGAGGGCCTCTGCAGATTGAGTGGAGGGAAGAAGATAATCATATTTATATGACAGGCTCAGCAGAACTAGTTTATTACGGATCCTTGCCCCTTTGA 1089 0.4775 MAIAASISLPLTSPTRRSLTSTNLLRPSSSSSSKSVLATPQRFLKYPNSRIIASSMSIDAPVKTCSSSFLDRKETGFLHFAKFHGLGNDFVLIDNRDSSDPKISAEKAVELCDRNFGVGADGVIFVLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVAQLENLHGRHSFNVHTGAGLIVPDIFEDGNVRVDMGEPILKASDVPTKLPPNKHGAIVNSELDVDGVIWNVTCVSMGNPHCVTFSNKGSQNLVVDELKLAEVGPKFEHHEVFPARTNTEFVQVLSNSHLKMRVWERGAGATLACGTGACATVVAAVLEGRAGRNCTVDLPGGPLQIEWREEDNHIYMTGSAELVYYGSLPL* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2652 362 SUPERFAMILY Diaminopimelate epimerase-like 222 360 - -
Dod01g2652 362 Pfam Diaminopimelate epimerase 234 355 IPR001653 GO:0008837|GO:0009089
Dod01g2652 362 Pfam Diaminopimelate epimerase 80 200 IPR001653 GO:0008837|GO:0009089
Dod01g2652 362 MobiDBLite consensus disorder prediction 17 36 - -
Dod01g2652 362 Hamap Diaminopimelate epimerase [dapF]. 78 362 IPR001653 GO:0008837|GO:0009089
Dod01g2652 362 ProSitePatterns Diaminopimelate epimerase signature. 141 155 IPR018510 GO:0005737|GO:0008837|GO:0009089
Dod01g2652 362 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 36 361 - -
Dod01g2652 362 TIGRFAM DapF: diaminopimelate epimerase 79 360 IPR001653 GO:0008837|GO:0009089
Dod01g2652 362 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 36 361 IPR001653 GO:0008837|GO:0009089
Dod01g2652 362 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 63 201 - -
Dod01g2652 362 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 202 352 - -
Dod01g2652 362 SUPERFAMILY Diaminopimelate epimerase-like 78 207 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2652 K01778 - gmx:100784731 585.489