Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2642 ATGACTGAAATCGTGATGGAGACCGAAAATGCTGCTAATATGGTTCCACCGCTTGAGACTCCAGAACTAGAGAAGGTTCCCATTCCTCTTTATTCCTCTCATCCACCTCTTAATGAGAGGATTATTTCATCCATGATCAGGAGGTCTGTTGCTGCACACCCTTGGCATGACCTTGAGATAGGACCTGGAGCTCCAAAGATCTTCAACTGTGTGGTTGAGATTGGGAAAGGAAGCAAGGTGAAATATGAGCTTGACAAAAAATCAGGACTTATTAAGGTAGATCGTGTACTTTACTCATCAGTTGTGTATCCCCACAACTACGGGTTCATCCCACGTACTATCTGTGAGGACAGTGATCCCCTGGATGTCTTGGTTATTATGCAGGAGCCAGTTCTTCCAGGGTGCTTTCTTCGTGCCAAAGCTATTGGTCTCATGCCCATGATTGATCAGGGTGAGAAAGATGACAAAATAATCGCTGTCTGTGCTGATGATCCTGAGTATCGACATTACAATGATATCAAGGAGCTTCCTCCACATCGTTTGGCTGAGATCCGTCGTTTCTTTGAGGACTACAAGAAGAATGAGAACAAGGAAGTTGCAGTGAACGACTTTCTGCCTGCCTCAACTGCATTTGAAGCGATCCAGCACTCCATGACACTGTATGCGGACTACATAGTGGAGAGCTTGAGGCGGTAG 696 0.4569 MTEIVMETENAANMVPPLETPELEKVPIPLYSSHPPLNERIISSMIRRSVAAHPWHDLEIGPGAPKIFNCVVEIGKGSKVKYELDKKSGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPLDVLVIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASTAFEAIQHSMTLYADYIVESLRR* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2642 231 ProSitePatterns Inorganic pyrophosphatase signature. 117 123 - -
Dod01g2642 231 Gene3D Inorganic pyrophosphatase 49 227 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Dod01g2642 231 CDD pyrophosphatase 67 218 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Dod01g2642 231 PANTHER BNAC07G03580D PROTEIN 37 230 - -
Dod01g2642 231 SUPERFAMILY Inorganic pyrophosphatase 48 226 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Dod01g2642 231 PANTHER INORGANIC PYROPHOSPHATASE 37 230 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Dod01g2642 231 Pfam Inorganic pyrophosphatase 70 221 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Dod01g2642 231 Hamap Inorganic pyrophosphatase [ppa]. 66 222 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2642 Dod-Chr1 65813498 65815911 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2642 K01507 - gmx:100784203 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2642 01 65813498 65815911 Dod07g0788 07 11202970 11206853 PCT