Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2612 ATGTCGTCGTCAAGTGTGAGAGCACAAGTGGTTGTGGCCACACTACTAGTGGTGGCAGTGATTGTTGTTGTTGGTGCAAGGAGCAGTACTGCTGCAGCAGGGAGGACCTTGTTTGTGTTTGGGGACTCACTTGTTGACAGTGGCAACAACAATTACTTGCCCACCACGGCACGCGCTGACTCTTCCCCTTACGGCATCGACTATCCAACCCATCGCCCCACTGGTCGCTTCTCCAATGGCTTCAACCTCCCTGACATCATCAGCCAGAGAATTGGGTCTGAACCCACGTTGCCGTACCTGAGCCCTGAATTAAATGGACAAAAACTCTTGGTTGGGGCCAACTTCGCTTCCGCTGGGATTGGAATCCTTAATGACACTGGCATCCAATTTGCGGGGATAATTAGAATGTTCCAGCAGTTTGCATTCTTCGAGCAGTATCAGCAGCGGTTGAGTGCAGAGGTAGGGCCAGAAAAGGCTCAGCAGATTGTGAATGGAGCTCTGGTGCTCATGACAATCGGTGGCAATGATTTCGTTAACAACTATTTCCTCACTCCTTTATCTCCAAGGTCTCGCCAATTCACCGTCCCCCAGTTCTCTCGCTACCTTATCTCCGAGTACAGAAAAATTCTCTTGAGATTGTATGAATTGGGGGCTCGTAGGGTGCTGGTGACGGGAACTGGTCCATTGGGGTGTGTTCCTTCTCAGCTCGCTTCAAGGAGCATGAACGGTGAATGTGTGCCAGAGTTACAGCAAGCAGCGCAGATATTCAACCCTCTCCTTGTCCAAATGACCAACGACCTCAACTCACAAGTCGGCGTCGACGTTTTCGTTGCTGTCAATGCCTTGGTAATGAACATGGACTTCATCTCCAACCCCCAAAGATTTGGTTTCATTACATCAAAGGTAGCATGTTGTGGTCAAGGTCCATACAACGGGGCGGGAACATGCAATTCCTTGTCTAGCCTCTGCCCAAACCGGGATGTCTACGCATTTTGGGACGCTTTCCACCCAACCCAACGTGCTCTCGGCTTCATTGTTGATGCAATCTTCGGTGGAACCAGTGACCTTATGACCCCTATGAACCTTACCACCATCATGGCCATCGATTCCTACATCTAA 1119 0.5022 MSSSSVRAQVVVATLLVVAVIVVVGARSSTAAAGRTLFVFGDSLVDSGNNNYLPTTARADSSPYGIDYPTHRPTGRFSNGFNLPDIISQRIGSEPTLPYLSPELNGQKLLVGANFASAGIGILNDTGIQFAGIIRMFQQFAFFEQYQQRLSAEVGPEKAQQIVNGALVLMTIGGNDFVNNYFLTPLSPRSRQFTVPQFSRYLISEYRKILLRLYELGARRVLVTGTGPLGCVPSQLASRSMNGECVPELQQAAQIFNPLLVQMTNDLNSQVGVDVFVAVNALVMNMDFISNPQRFGFITSKVACCGQGPYNGAGTCNSLSSLCPNRDVYAFWDAFHPTQRALGFIVDAIFGGTSDLMTPMNLTTIMAIDSYI* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2612 372 CDD SGNH_plant_lipase_like 36 352 IPR035669 -
Dod01g2612 372 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 11 369 - -
Dod01g2612 372 Gene3D SGNH hydrolase 26 354 IPR036514 -
Dod01g2612 372 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 11 369 - -
Dod01g2612 372 Pfam GDSL-like Lipase/Acylhydrolase 37 344 IPR001087 GO:0016788
Dod01g2612 372 SUPERFAMILY SGNH hydrolase 36 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2612 Dod-Chr1 65387485 65390920 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2612 37 366 Acyl Lipid Metabolism Gene Families AT4G10950 33.434 1.63e-59 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2612 - - gmx:100800835 584.719