Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2589 ATGGAGGAGGAAGAGGGTGACATGTACGAGGGCGTAAGGGCTCAGTTCCCTCTCAGCTTCGGCAAGCAATCCAAATCTCAGACAAGTCTCGAAGCCATCCACAACGCCACGCGCCGCTCCAACGCTCCTCCCAATCTCACCTCCAAACCCACTAGCGGTCTTCCTTCTCTCTCTTCCTCTTCCAAGGAATGGCTTACTTCCCTTCGCTCCTCCAAAAACCCTACCCCTCCCCGTTTTGCTGCCGATCGCGGAGGCCCTTCCGTGATCGGGCCGCCGCCGCCTCCTCACAATCCGCCTGGCAAGGATTCCGAACAGGATGATGACGTCATGGTGGGCCCGCCTCCCCCGCCGCCAGGGGTGGACGAGGAGGAGGAGGAGGACGACGACGACGACGGTGAGATGATTGGGCCGCCGCGCCCGCCTCCGGCTGGTTCCAATTTGAGCTCCGATGAGGAAGGTTCCGATGAAGAGGAGCTGGGAAACCGGTTCCGGATTCCGCTTAGCAACGAGATTGTCCTCAAGGGTCACACCAAGGTTGTGTCAGCTCTTGCCGTGGATCACACTGGATCTAGAGTGCTTTCTGGAAGTTATGACTATACAGTACGCATGTATGACTTTCAAGGAATGAATTCTCGTTTGCAATCATTTCGACAACTGGAGCCATTTGAAGGTCATCAAGTTCGCAATTTAAGCTGGAGCCCAACTGCAGATCGCTTTTTGTGTGTGACTGGATCAGCTCAAGCAAAGATTTATGATCGTGATGGGCTTACTTTGGGAGAGTTTATGAAAGGAGACATGTACATTCGTGATCTAAAGAATACCAAGGGCCACATATCTGGATTGACATGTGGAGAGTGGCATCCAAAAACTAAAGAGACAATTTTAACATCATCAGAGGATGGGTCACTACGTATATGGGATGTAAATGACTTCAAAAGTCAGAAGCAGGTCATTAAACCAAAGCTTGCAAGACCTGGAAGAGTTCCTGTAACCACATGTGCTTGGAACTGTGATGGTAAATGCATTGCTGGTGGTATTGGAGATGGTTCTATACAGGTTTGGAATATTAAGCCAGGGTGGGGGAGTAGGCCAGATATACATATTGAAAAATGTCATTCAGATGATATAACTGGTCTGAAATTTTCTAGTGATGGGACTATCTTATTGTCAAGAAGCTTTGATGGTTCGTTAAAGGTTTGGGATTTGCGCAAAACGAAGGAAGCTTTGAAGGTATTTGAGGATCTTCCAAATAACTATGGACAAACAAATATTGCCTTCGGTCCTGGTGAGCAACTCTTTTTTACTGGAACATCTGTTGAAAGGGAGAGCTCAACTGGAGGTTTACTGTGCTTCTTTGATAGAGCAAACCTTGAGCTTGTTTCAAAAGTTGGAATATCTTCCACTTGTAGTGTTGTTCAGTGTTCTTGGCATCCTAAACTGAATCAGATCTTTGCAACTGTTGGTGATAAAAGCCAAGGAGGGACTCACATACTATATGATCCGAACCTCAGCGAGAGAGGAGCCCTTGTTTGTGTTGCTCGTGCACCAAGGAAAAAATCAATTGATGATTTTGAGGCAAAACCTGTGATTCACAATCCTCATGCTTTGCCACTATTTAGAGATCAGCCGAGCCGCAAGCGTCAGCGAGAGAAAATACTAAAGGATCCATTGAAGTCCCATAAGCCTGAACTTCCCATAACAGGACCTGGCTTTGGTGGAAGGGTTGGTTCAAGTCAAGGAAGCTTACTGACCCAGTATCTTCTAAAGCAAGGGGGCATGATCAAGGAGACATGGATGGAGGAGGATCCAAGGGAAGCTATATTGAAATATGCTGATGTTGCAGCAAAGGATCCAAAGTTCATTGCTCCAGCATATGCAGAAACCCAACCTGAGCCAGTTTTTGCAAAATCGGATTCTGAGGATGAAGAGAAATGA 1935 0.4734 MEEEEGDMYEGVRAQFPLSFGKQSKSQTSLEAIHNATRRSNAPPNLTSKPTSGLPSLSSSSKEWLTSLRSSKNPTPPRFAADRGGPSVIGPPPPPHNPPGKDSEQDDDVMVGPPPPPPGVDEEEEEDDDDDGEMIGPPRPPPAGSNLSSDEEGSDEEELGNRFRIPLSNEIVLKGHTKVVSALAVDHTGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSWSPTADRFLCVTGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHISGLTCGEWHPKTKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLARPGRVPVTTCAWNCDGKCIAGGIGDGSIQVWNIKPGWGSRPDIHIEKCHSDDITGLKFSSDGTILLSRSFDGSLKVWDLRKTKEALKVFEDLPNNYGQTNIAFGPGEQLFFTGTSVERESSTGGLLCFFDRANLELVSKVGISSTCSVVQCSWHPKLNQIFATVGDKSQGGTHILYDPNLSERGALVCVARAPRKKSIDDFEAKPVIHNPHALPLFRDQPSRKRQREKILKDPLKSHKPELPITGPGFGGRVGSSQGSLLTQYLLKQGGMIKETWMEEDPREAILKYADVAAKDPKFIAPAYAETQPEPVFAKSDSEDEEK* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2589 644 MobiDBLite consensus disorder prediction 19 74 - -
Dod01g2589 644 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 274 309 - -
Dod01g2589 644 ProSitePatterns Trp-Asp (WD) repeats signature. 294 308 IPR019775 -
Dod01g2589 644 SMART WD40_4 264 307 IPR001680 GO:0005515
Dod01g2589 644 SMART WD40_4 362 401 IPR001680 GO:0005515
Dod01g2589 644 SMART WD40_4 166 205 IPR001680 GO:0005515
Dod01g2589 644 SMART WD40_4 215 252 IPR001680 GO:0005515
Dod01g2589 644 SMART WD40_4 311 355 IPR001680 GO:0005515
Dod01g2589 644 PRINTS G protein beta WD-40 repeat signature 342 356 IPR020472 -
Dod01g2589 644 PRINTS G protein beta WD-40 repeat signature 388 402 IPR020472 -
Dod01g2589 644 PRINTS G protein beta WD-40 repeat signature 294 308 IPR020472 -
Dod01g2589 644 ProSiteProfiles Trp-Asp (WD) repeats profile. 173 214 IPR001680 GO:0005515
Dod01g2589 644 MobiDBLite consensus disorder prediction 543 565 - -
Dod01g2589 644 Gene3D - 119 260 IPR015943 GO:0005515
Dod01g2589 644 Gene3D - 261 502 IPR015943 GO:0005515
Dod01g2589 644 Pfam WD domain, G-beta repeat 272 307 IPR001680 GO:0005515
Dod01g2589 644 Pfam WD domain, G-beta repeat 171 205 IPR001680 GO:0005515
Dod01g2589 644 Pfam WD domain, G-beta repeat 368 401 IPR001680 GO:0005515
Dod01g2589 644 Pfam WD domain, G-beta repeat 329 355 IPR001680 GO:0005515
Dod01g2589 644 ProSitePatterns Trp-Asp (WD) repeats signature. 342 356 IPR019775 -
Dod01g2589 644 SUPERFAMILY WD40 repeat-like 161 489 IPR036322 GO:0005515
Dod01g2589 644 ProSiteProfiles Trp-Asp (WD) repeats profile. 274 316 IPR001680 GO:0005515
Dod01g2589 644 MobiDBLite consensus disorder prediction 625 644 - -
Dod01g2589 644 MobiDBLite consensus disorder prediction 119 133 - -
Dod01g2589 644 CDD WD40 172 491 - -
Dod01g2589 644 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 173 207 - -
Dod01g2589 644 MobiDBLite consensus disorder prediction 1 159 - -
Dod01g2589 644 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 369 403 - -
Dod01g2589 644 MobiDBLite consensus disorder prediction 543 561 - -
Dod01g2589 644 PANTHER GASTRULATION DEFECTIVE PROTEIN 1-RELATED 4 644 - -
Dod01g2589 644 ProSiteProfiles Trp-Asp (WD) repeats profile. 369 410 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2589 276 468 Miscellaneous Gene Families AT5G08390 23.711 1.16e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2589 K24752 - gmx:100815380 1057.36