Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2588 ATGGAAGAGAAAGAGGGTAGTTTGAAAGGAGGGAGTTTTAGGAAGAGTTTGAAGATAGTGAGTTCATCATCAGTTTGGGGTGACACAAGTGGTGTGGAAGTGTTCTCGAACAGCTCTTTCCATGATGAGGAGGACGATGAAGAAGCTCTCAAGTGGGCTGCCATTCAGAAACTCCCGACGGTTGTGCGTCTGAGGAAAGGTTTGCTGAGCACACCTGAAGGGGAATCCACTCAGGTCGATGTGCCCAAACTTAGGTTGCAAGAAAGGAGAGCTTTGCTTGAGAGGCTCGTCAGAGTTGCTGAAGACGACAATGAGAAGTTCATGCTCAAGCTCAGGGATCGTATTGACACGGTTGGAATTACTCTTCCCACGATAGAGGTCCGATTTGAGCACTTGAACGTGGAAGCACAAGTCCACGAAGGAAGCAGAGCTTTGCCCACCATCACTAACTACATGATTAATCTAGTGGAAGGCCTATTGAACTCCCTTCATGTAATCCCAAATAGAAGGCAACATATAAAGATTCTCGATGATGTTAGTGGCATTATAAAACCTGCCAGAATGACATTGCTTTTGGGCCCTCCAAGTTCTGGGAAGACCACACTGCTGTTGGCTTTGGCTGGAGAACTTGATTCAAAACTAGAGCTCAGTGGAAAGATAACTTATAATGGTCATGAGATGAATGAGTTTGTTCCCCAACGAACTGCTGCCTATGTAAGTCAAAATGATCTTCATGTTGGAGAAATGACTGTTAGGGAAACGTTGGCCTTCTCAGCAAGAGTACAAGGAGTTGGACCTCGTTATGACTTGCTAGCAGAGGTGTCTAGAAGAGAAAAAGAGGCAAATATTACGCCTGACCCAGATATCGATGTCTATATGAAGGCTGTAGCAACTGAAGGCCAAAAGGCAAATTTGATTACAGATTATATTCTAAGGGTGTTGGGACTGGAGGTCTGTGCTGATACCATTGTAGGGAATGCAATGTTAAGAGGTGTCTCTGGTGGACAAAGAAAACGTGTTACAACAGGGGAGATGCTGGTTGGACCGGCTAAAGCTCTATTCATGGATGAAATATCTACTGGTTTGGACAGCTCAACAACTTTCCAAATTGTGAATTCACTAAAGCAATATGTCCACATTCTCAAAGGAACTGCACTGATCTCACTCCTGCAGCCAGCACCAGAGACTTACAATCTTTTTGATGACATTATTGTACTCTCTGATAGCCACATTGTGTACCAGGGTCCCCGCGAACATGTGCTCGAGTTCTTCGAATCAATGGGATTCAAATGTCCTGATAGGAAAGGTGTGGCAGACTTTTTGCAAGAAGTGACATCAAGGAAAGATCAGGAGCAGTACTGGGCACACAAGGATCAGCCTTGTAGATTTGTCACAGCCGAAGAGTTTTCTGAGGCATTTCAGTCATTTCATGTTGGGAGAAGACTTGGTGATGAACTTGCTACTGAATTTGACAAATCTAAGAGCCACCCTGCGGCTTTGACGACCAAAAAGTATGGAGTGGGAAAATGGGAGTTGTTGAAAGCTTGCTTATCGAGAGAGTATTTACTTATGAGGCGCAATTCATTTGTCTACATCTTCAAGCTTTGCCAAGTTGCTGTAATGGCAATTATTGCCATGACCATTTTTCTCCGGACAGAGATGCACCGAGATTCGGTGACTCATGGAGGCATCTATGTTGGTGCATTGTTCTATGGTGTTGTTGTGATTATGTTCAATGGATTGGCTGAGCTTTCCATGGTGGTTTCAAGGCTTCCTGTTTTCTATAAGCAAAGGGAGCATCTCTTCTTCCCTTCATGGGTATTTGCTCTTCCCGCATGGATCCTGAAAATCCCCATGACCTTTGTGGAAGTGGGTGTTTGGGTATTCCTTACCTACTATGTCATTGGTTTTGATCCAGATGTTACAAGATTTTTCAGGCAATACCTTCTTCTTGTACTAGTAAACCAGATGGCTTCTGCATTATTCCGATTTATTGCTGCAGTTGGTAGGGAAATGACAGTGGCTCTAACATTTGGGTCATTTGCATTGGCCATCCTTTTTGCTATGAGTGGTTTTGTCTTGTCCAAAGACAATATAAAAAAATGGTGGCTTTGGGGATTTTGGATGTCACCTATGATGTATGGACAGAATGGCATGGTGAATAATGAGTTCCTTGGAAAAAGATGGAGACATGCTTTACCCGGTTCGGCGGAACCTCTAGGCGTTGAAGTTTTGAAATCTCGCGGGTTCTTTACTCACCCTTACTGGTATTGGATAGCTATTGGGGCTTTGATTGGATACACATTACTTTTCAACTTCGGCTACATCCTTGCTCTCACCTTCTTGAATCCATTTGGGAAGCATCAGTCTGTTAAATCTGATCAACCTGAAAGCAATGAGCACAAAGGAGGTAGTAGTAGTAAGAGAGGAACTAATATGTTGAGGCACTTAAAAAATAGCTTCTCTCAACACTCAAATAGAGTGGGAAATGGAGACAGAATAAGCGGACAAGAAGCAGCTGCTGCAGGGACAAATCACAACAGAAGAGGAATGATTCTTCCTTTTGAACCACATTCCATCACATTTGATGAAGTAACATATGCTGTTGACATGCCACTGGCAATGAAGAACCGGGGTGTTGTTGAGGATAAGTTGGTTCTTTTGAAGGGTGTCAGTGGAGCTTTCAGGCCAGGTGTTCTCACTGCTCTAATGGGTGTCACTGGTGCTGGCAAAACAACTCTGATGGATGTCCTAGCAGGTAGAAAAACTGGTGGATATATTGGGGGGAACATCACGGTTTCTGGATATCCAAAGAAGCAAGAAACATTTGCAAGAATTTCTGGATACTGTGAGCAAAATGATATTCACTCTCCTCATGTTACTGTATATGAATCCTTGCTCTATTCAGCATGGCTCCGATTGTCCCCAGACATCAATGCTGAAACCAGGAAGATGTTCATTGAGGAAGTAATGGAACTTGTTGAGCTGAAACCACTGAGGCATGCATTAGTTGGATTGCCTGGTGTTAGTGGTCTCTCAACAGAACAGCGAAAAAGGTTGACCATAGCAGTTGAGCTGGTGGCAAATCCTTCTATAATATTCATGGATGAGCCAACTTCTGGGTTAGATGCAAGAGCTGCTGCTATTGTCATGAGAACAGTTAGGAACACAGTAGACACTGGAAGAACAGTTGTCTGTACCATTCATCAGCCTAGCATTGATATATTTGAGTCTTTTGATGAGCTTTTGCTAATGAAGCAAGGAGGTCAAGAGATATATGTGGGGCCACTTGGACATCATTCTTCCACTTTAATTAGTTACTTTGAGGGAATCCAAGGTGTCAGTAAGATTAACGAAGCCTATAATCCAGCAACATGGATGTTGGACATCACCACTGCAGCTAAAGAAAATGAATTGGAGATAGATTTTTCTCAAGTTTACAAAAATTCAGATTTATACAGGAGAAACAAGGAACTGATCAAAGAATTGAGTACTCCAGCTCCTGGTTCAAAAGACCTTTATTTTCCTTCACAGTACTCAACATCCCTATTCACACAATGCATGGCTTGCTTGTGGAAGCAACATTGGTCTTACTGGCGCAATCCTCTATACACTGCGATAAGATTTCTTTATTCAACTGCAGTGGCTGTTCTGCTTGGGAGCATGTTTTGGAACCTTGGCTCCAACATTGAAAAGCAACAAGATCTTTTCAATGCCATGGGATCCATGTATGCTGCTGTTCTCCTCATTGGTATCAAGAATGGTAATGCAGTGCAGCCAGTTGTTGCTGTCGAGCGAACAGTCTTTTATAGGGAAAGAGCTGCTGGAATGTATTCAGCTTTGCCATATGCTTTTGCTCAGGTTCTAATTGAGGTCCCATATGTTCTTGCACAAGCGGTGGTCTATGGCTTTATAATATATGCAATGATTGGTTTTGAGTGGAATGTTACAAGAGTGTTGTGGTACCTATTCTTCATGTATTTCACCTTCCTGTACTTCACCTACTATGGAATGATGTCTGTGGCTATGACTCCAAACCAACACATATCCACTATTGTTGCTTCTGCATTCTATTCACTGTGGAATCTCTTCTCAGGATTCATAATCCCAAGACCAAGCATCCCAGTATGGTGGAGATGGTACTATTGGGCCAATCCAGTGGCTTGGAGTTTGTATGGTTTGGTGGCATCACAATATGGAGATATGAATGGAGGAATTACATCAAGTGATGGAAGTGCAACAATAGAAGGCTTTCTGAGAAGTTACTTTGGTTTCAAGCATGATTTCTTGGGAGTGGTTGCAGCTGTGGTGGTTGGATTTGGAGCAGTTTTTGCTTTGATCTTTGCCATATCTGTCAAGATGTTTAATTTCCAGCGGCGCTAA 4383 0.4294 MEEKEGSLKGGSFRKSLKIVSSSSVWGDTSGVEVFSNSSFHDEEDDEEALKWAAIQKLPTVVRLRKGLLSTPEGESTQVDVPKLRLQERRALLERLVRVAEDDNEKFMLKLRDRIDTVGITLPTIEVRFEHLNVEAQVHEGSRALPTITNYMINLVEGLLNSLHVIPNRRQHIKILDDVSGIIKPARMTLLLGPPSSGKTTLLLALAGELDSKLELSGKITYNGHEMNEFVPQRTAAYVSQNDLHVGEMTVRETLAFSARVQGVGPRYDLLAEVSRREKEANITPDPDIDVYMKAVATEGQKANLITDYILRVLGLEVCADTIVGNAMLRGVSGGQRKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVNSLKQYVHILKGTALISLLQPAPETYNLFDDIIVLSDSHIVYQGPREHVLEFFESMGFKCPDRKGVADFLQEVTSRKDQEQYWAHKDQPCRFVTAEEFSEAFQSFHVGRRLGDELATEFDKSKSHPAALTTKKYGVGKWELLKACLSREYLLMRRNSFVYIFKLCQVAVMAIIAMTIFLRTEMHRDSVTHGGIYVGALFYGVVVIMFNGLAELSMVVSRLPVFYKQREHLFFPSWVFALPAWILKIPMTFVEVGVWVFLTYYVIGFDPDVTRFFRQYLLLVLVNQMASALFRFIAAVGREMTVALTFGSFALAILFAMSGFVLSKDNIKKWWLWGFWMSPMMYGQNGMVNNEFLGKRWRHALPGSAEPLGVEVLKSRGFFTHPYWYWIAIGALIGYTLLFNFGYILALTFLNPFGKHQSVKSDQPESNEHKGGSSSKRGTNMLRHLKNSFSQHSNRVGNGDRISGQEAAAAGTNHNRRGMILPFEPHSITFDEVTYAVDMPLAMKNRGVVEDKLVLLKGVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTGGYIGGNITVSGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLSPDINAETRKMFIEEVMELVELKPLRHALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLMKQGGQEIYVGPLGHHSSTLISYFEGIQGVSKINEAYNPATWMLDITTAAKENELEIDFSQVYKNSDLYRRNKELIKELSTPAPGSKDLYFPSQYSTSLFTQCMACLWKQHWSYWRNPLYTAIRFLYSTAVAVLLGSMFWNLGSNIEKQQDLFNAMGSMYAAVLLIGIKNGNAVQPVVAVERTVFYRERAAGMYSALPYAFAQVLIEVPYVLAQAVVYGFIIYAMIGFEWNVTRVLWYLFFMYFTFLYFTYYGMMSVAMTPNQHISTIVASAFYSLWNLFSGFIIPRPSIPVWWRWYYWANPVAWSLYGLVASQYGDMNGGITSSDGSATIEGFLRSYFGFKHDFLGVVAAVVVGFGAVFALIFAISVKMFNFQRR* 1461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2588 1460 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 433 IPR027417 -
Dod01g2588 1460 Pfam ABC-2 type transporter 1185 1399 IPR013525 GO:0016020|GO:0140359
Dod01g2588 1460 Pfam ABC-2 type transporter 512 724 IPR013525 GO:0016020|GO:0140359
Dod01g2588 1460 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 20 1460 - -
Dod01g2588 1460 Gene3D - 161 471 IPR027417 -
Dod01g2588 1460 PANTHER ATP-BINDING CASSETTE TRANSPORTER 20 1460 - -
Dod01g2588 1460 Pfam Plant PDR ABC transporter associated 729 791 IPR013581 -
Dod01g2588 1460 CDD ABCG_PDR_domain2 857 1095 IPR034003 -
Dod01g2588 1460 Pfam ABC-transporter N-terminal 100 150 IPR029481 -
Dod01g2588 1460 SMART AAA_5 897 1089 IPR003593 -
Dod01g2588 1460 SMART AAA_5 185 410 IPR003593 -
Dod01g2588 1460 Pfam ABC-2 type transporter 391 470 IPR043926 GO:0140359
Dod01g2588 1460 Pfam ABC-2 type transporter 1069 1137 IPR043926 GO:0140359
Dod01g2588 1460 MobiDBLite consensus disorder prediction 790 811 - -
Dod01g2588 1460 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 160 433 IPR003439 GO:0005524
Dod01g2588 1460 Coils Coil 83 103 - -
Dod01g2588 1460 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 873 1095 IPR027417 -
Dod01g2588 1460 Pfam ABC transporter 888 1040 IPR003439 GO:0005524
Dod01g2588 1460 Pfam ABC transporter 176 358 IPR003439 GO:0005524
Dod01g2588 1460 Gene3D - 872 1103 IPR027417 -
Dod01g2588 1460 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 860 1112 IPR003439 GO:0005524
Dod01g2588 1460 CDD ABCG_PDR_domain1 166 415 IPR034001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2588 Dod-Chr1 65107226 65152239 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2588 K08711 - gmx:732607 2459.1