Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2587 ATGGAAGAAGAAAACCAAAGTGAGTTGAGGTTGAGGCCCATGGACGCCGAGCAGCTCAGGGAGCAGGCTCATAAGATGGTCGACTTCATTGCTGATTACTACAAAACCATCGAAAATTTCCCAGTTCTCAGCCAAGTTCAGCCAGGTTATCTTGGGAAGCTTTTACCGGATTCTGCACCTGATTATCCTGAATCATTGCAGCATGTGTTGAATGATGTACAGGAAAAGATATTGCCAGGGGTGACACATTGGCAAAGCCCCAATTATTTTGCATATTTTCCTTCCAACAGTAGTATTGCTGGATTTCTTGGAGAAATGCTCAGTGCTGGTCTTAACATTGTGGGTTTCAGCTGGATAACCTCTCCTGCTGCAACTGAACTCGAAACCATTGTTCTCGACTGGCTTGCTAAGGCACTCAAGCTGCCGGATGATTTCTATTCTACTGGGCAAGGTGGTGGAGTTATACAGGGAACAGCGAGTGAAGCTGTATTAGTTGTCCTGTTGGCAGCTCGTGACAAGATCTTAAGAAGGGTCGGAAAGAGTGCCCTTCCTAAGCTTGTGACATATGCGTCTGATCAAACACACTCTTCTTTACTAAAAGCCTGCCAGATAGCAGGGCTTAATCCTGAGCTTTGCAGGTTGCTTAAAACTGATTCTTCCACAAATTATGCTCTTTCTCCTGATGCATTTTCTGAAGCAATTTCAAGTGACATTGCCAACGGTCTTATACCGTTGTTCTTATGTGCCACCGTTGGTACCACTTCGTCAACAGCTGTTGATCCTCTGCCTGCATTGGGAAAAATTACTAAGGCCAACAAAATTTGGTTTCATGTTGATGCTGCTTATGCTGGAAGTGCTTGTATATGTCCAGAGTACCGACATCATATTGATGGTGTTGAAGAAGCAGACTCATTTAACATGAATGCGCATAAATGGTGTCTGACCAACTTTGACTGTTCACTACTTTGGGTCAAGGACAGGAGTGCTTTGATTCAGTCGCTATCCACGAACCCTGAATATCTGAAAAACAAGGCCTCCCAAGGAAATATGGTCATAGATTACAAAGATTGGCAAATTCCTCTTGGACGCCGCTTTAGATCGTTAAAGCTATGGATGGTGTTGCGTCTCTATGGATTGGAAGGTCTGAGAAATCAAATAAGAAACCACGTTAAGTTGGCTGCTTATTTTGAGGAACTTGTTGGTCAGGACCCAAGATTCAAGGTTGTTGCACCTCGCACGTTCTCTTTAGTTTGTTTCCGGCTTTTGCCTCCTCCCAACTCTGAAGATCATGGGAATAAGCTAAATCGTGATCTACTTGACTCAGTAAATTCAACAGGAAGTGTTTTCATAACACACACGGTCCTATCAGGTGAATACATTCTACGTTTCGCAGTAGGGGCACCATTGACAGAAGAGAGGCATGTCAGTGTAGCGTGGCAAATTTTGCAAGATAAAGCCACTGCTCTACTTGGCAGTTTATAG 1482 0.4393 MEEENQSELRLRPMDAEQLREQAHKMVDFIADYYKTIENFPVLSQVQPGYLGKLLPDSAPDYPESLQHVLNDVQEKILPGVTHWQSPNYFAYFPSNSSIAGFLGEMLSAGLNIVGFSWITSPAATELETIVLDWLAKALKLPDDFYSTGQGGGVIQGTASEAVLVVLLAARDKILRRVGKSALPKLVTYASDQTHSSLLKACQIAGLNPELCRLLKTDSSTNYALSPDAFSEAISSDIANGLIPLFLCATVGTTSSTAVDPLPALGKITKANKIWFHVDAAYAGSACICPEYRHHIDGVEEADSFNMNAHKWCLTNFDCSLLWVKDRSALIQSLSTNPEYLKNKASQGNMVIDYKDWQIPLGRRFRSLKLWMVLRLYGLEGLRNQIRNHVKLAAYFEELVGQDPRFKVVAPRTFSLVCFRLLPPPNSEDHGNKLNRDLLDSVNSTGSVFITHTVLSGEYILRFAVGAPLTEERHVSVAWQILQDKATALLGSL* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2587 493 Gene3D Aspartate Aminotransferase, domain 1 388 493 IPR015422 GO:0003824
Dod01g2587 493 PRINTS Aromatic-L-amino-acid decarboxylase signature 60 79 IPR010977 GO:0006520|GO:0016831
Dod01g2587 493 PRINTS Aromatic-L-amino-acid decarboxylase signature 403 422 IPR010977 GO:0006520|GO:0016831
Dod01g2587 493 PRINTS Aromatic-L-amino-acid decarboxylase signature 42 59 IPR010977 GO:0006520|GO:0016831
Dod01g2587 493 PRINTS Aromatic-L-amino-acid decarboxylase signature 360 375 IPR010977 GO:0006520|GO:0016831
Dod01g2587 493 PRINTS Aromatic-L-amino-acid decarboxylase signature 126 145 IPR010977 GO:0006520|GO:0016831
Dod01g2587 493 PRINTS Aromatic-L-amino-acid decarboxylase signature 151 171 IPR010977 GO:0006520|GO:0016831
Dod01g2587 493 PRINTS Aromatic-L-amino-acid decarboxylase signature 86 105 IPR010977 GO:0006520|GO:0016831
Dod01g2587 493 PRINTS Aromatic-L-amino-acid decarboxylase signature 19 38 IPR010977 GO:0006520|GO:0016831
Dod01g2587 493 PRINTS Aromatic-L-amino-acid decarboxylase signature 107 125 IPR010977 GO:0006520|GO:0016831
Dod01g2587 493 PANTHER GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE 14 492 - -
Dod01g2587 493 PANTHER BNAA07G00240D PROTEIN 14 492 - -
Dod01g2587 493 SUPERFAMILY PLP-dependent transferases 14 486 IPR015424 -
Dod01g2587 493 Pfam Pyridoxal-dependent decarboxylase conserved domain 48 421 IPR002129 GO:0016830|GO:0019752|GO:0030170
Dod01g2587 493 CDD DOPA_deC_like 89 484 - -
Dod01g2587 493 Gene3D - 10 94 - -
Dod01g2587 493 Gene3D - 95 387 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2587 Dod-Chr1 65081312 65093810 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2587 K01593 - gmx:100791074 882.478