Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2575 ATGCAATCGACGGGTCAGATCGCACCATTATCCAGCACCAACGGCGTCCATACAGCAGTAGCATCAAACGCCATGGATCCGCTAGCACAAACTCACTGCTCTCTCTATATAAATTCACCACCTCAGGTTCGATGTGCCCTACTTCACAATTTTCCAAATTTGCCAGTTTTAGTCTCATCCCGAACCAACGACTCTCCCTCTCTGCGCGACGAAGCCATTTCTCTCTCGCTCTCTGCCCTTCCAGTTGAAGGTGAAAGATCTTGTTATTCAACTATGGGAGATAACGAAACTGTAGTTGCTGAAGCATCTTCAGCTGGTGGGTATGCTGAAACTGTCTCGAACCCTAGCCATGAGTCAGCTCCTACTGTTGCTTCTGACTCTGCTGGAGAGGCTGCTCAGGTCAATTCAACTTATGACTTTGGTTATTCTAATGCTGGTGACGGGAATACATACGCTGCGGATCCTAATTCTGTGCTGCAACAAGCCCAATTCACCGCAACTGATGATTCCAAGCAAGCTGTTGGAGTGACTGGTGCTAATGAAGCTTCCACTGGGAATGCAGCTACAGAGTCTAATCAAGTTCCTCAAGTTGCCGACTACAATTCGTCTGTAAACGGTGGGGCTGTGGGTGCAGTTGCAAATGGGAATGCTTTGGAGAACACTGATGGGTCGGCGGCTGATGAGAAACAGCTTGCTGATGGTTATGCTGCCTTGTCTGCCGAAGAAGATCGGTTGTGGAATATTGTAAGAGCTAATTCTTTAGATTTTACTGCTTGGACATCCTTGATTGAAGAGACAGAGAAGGTGGCAGAGGATAATATTTTGAAGATTCGAAGAGTTTATGATGCTTTTCTAGCAGAATTTCCCTTATGTTATGGTTATTGGAAGAAATATGCTGACCATGAGGCACGTCTTGGCTCTGTCGATAAAGTTGTTGAAGTTTATGAACGTTCTGTTCAAGGGGTTACATATTCAGTGGACATGTGGTTGCATTATTGCATATTTGCTATAAGCACTTATGGGGATCCAGACACAGTGCGTAGGCTTTTTGAACGAGGATTAGCTTATGTTGGAACAGATTATCTTTCTTTTCCACTTTGGGATAAGTACATTGAATTTGAGTACATGCAGCAAGACTGGGCCCGCCTTGCCAATATCTACACTAGAATATTAGAGAATCCAAATCAGCAATTGGATCGGTATTTCAGCAGTTTCAAGGAGTTAGCTGGAAATCGACCTCTGTCGGAGCTTAGGAGTGCTGATGAAGCTGCTGCAGTGGCAGGTGCTGTTTCAGAGGCTGCTGGCCAAACTATTGAGGGAGAGATTCGTCCTGATGGTGCAGAGAATTCTCCTAAACCTGTAAGTGCTGGATTAACAGAAGCAGAGGAGTTGGAGAAGTATATCGCCATTAGAGAAGAGATGTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATCAGGAGGCCTTACTTTCATGTACGGCCACTCAATGTTGGAGAGCTTGAAAATTGGCATAATTATCTGGATTTTATAGAGAGGGAAGGTGACTTAAGCAAGATTGTCAAGTTGTATGAGAGATGTGTCATTGCGTGTGCCAACTACCCTGAGTACTGGATACGCTATGTTTTGTGCATGGAAGCCAGTGGAAGCATGGATCTTGCAAATAATGTGCTTGCTCGGGCAACCCAAGTCTTTGTCAAGAGACAACCTGAGATACATCTCTTTTGTGCTCGGTTTAAGGAGCAGACTGAAGATATAGCTGGTGCTAGAGCTGCTTATCAACTTGTGCATACTGAAATTTCTCCTGGTCTTCTTGAAGCGATAATCAGGCATGCCAATATGGAATATCGACTGGGAAAGTTGGAGGATGCTTTCTCTTTGTATGAACAAGCCATTGCTATTGAGAAAGGAAAGGAGCATTCACAAACATTGCCAATGCTGTTTGCTCAATATTCTCGATTTGTCTACTTGGCTTCTGGGAATGCGGAAAAGGCAAGACAAATTTTAGTTGAAGGGATTGAGAATGTCACGATGTCAAAGCCACTACTCGAGGCTTTATTGCATTTTGAGGCTATTCAGCCCCTGCCAAAGCGAGTTGATATAAACTTTCTGGAGTCACTGGTTGTAAAATTTGTAATGCCCAACCCAGAGAGCCCTGGAGTAGCAAGTCCAACTGATCGTGAGGAACTTTCTAGCATCTTTCTGGAGTTTTTGAATCTCTTTGGAGATGTTCAATCTATCAAGAGGTGTGAGGATAGGCACGCCAAATTGTTCTTGCCACATAGGAGCATGTCAGAGTTGAAAAAACGTCATGCGGAGGATTTCTTAGCTTCAGATAAAACAAAAGTGGCGAGATCATATTCTGCTCCATCGTCTGCCCAATCTGTGATGGGTGCGTATCCGAATGCGCAGAACCAGTGGACTAATTATGGTGCACAACCGCAAGCTTGGCCACCGGCCACACAAGCACAACAATGGACTGCTGCTGGCTACACACAGCAGGCTTCATATGGGGCTTATGCTGGATATGGAGGCAACTATGCAACCTCACAGTTGCCTGCATCTGTTCCACAAAGTACTGCATACGGAGCCTATCCTCCAGCCTATCCGGGACAGGTACAATCCAGTTTCAGCTGTTATTTTTTTTGTGATTGTTTGGCCTGA 2682 0.4474 MQSTGQIAPLSSTNGVHTAVASNAMDPLAQTHCSLYINSPPQVRCALLHNFPNLPVLVSSRTNDSPSLRDEAISLSLSALPVEGERSCYSTMGDNETVVAEASSAGGYAETVSNPSHESAPTVASDSAGEAAQVNSTYDFGYSNAGDGNTYAADPNSVLQQAQFTATDDSKQAVGVTGANEASTGNAATESNQVPQVADYNSSVNGGAVGAVANGNALENTDGSAADEKQLADGYAALSAEEDRLWNIVRANSLDFTAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARLGSVDKVVEVYERSVQGVTYSVDMWLHYCIFAISTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEFEYMQQDWARLANIYTRILENPNQQLDRYFSSFKELAGNRPLSELRSADEAAAVAGAVSEAAGQTIEGEIRPDGAENSPKPVSAGLTEAEELEKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVGELENWHNYLDFIEREGDLSKIVKLYERCVIACANYPEYWIRYVLCMEASGSMDLANNVLARATQVFVKRQPEIHLFCARFKEQTEDIAGARAAYQLVHTEISPGLLEAIIRHANMEYRLGKLEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNAEKARQILVEGIENVTMSKPLLEALLHFEAIQPLPKRVDINFLESLVVKFVMPNPESPGVASPTDREELSSIFLEFLNLFGDVQSIKRCEDRHAKLFLPHRSMSELKKRHAEDFLASDKTKVARSYSAPSSAQSVMGAYPNAQNQWTNYGAQPQAWPPATQAQQWTAAGYTQQASYGAYAGYGGNYATSQLPASVPQSTAYGAYPPAYPGQVQSSFSCYFFCDCLA* 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2575 893 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 152 852 - -
Dod01g2575 893 MobiDBLite consensus disorder prediction 106 128 - -
Dod01g2575 893 PANTHER PRE-MRNA-PROCESSING FACTOR 39 152 852 - -
Dod01g2575 893 Gene3D Tetratricopeptide repeat domain 247 413 IPR011990 GO:0005515
Dod01g2575 893 SUPERFAMILY TPR-like 249 411 IPR011990 GO:0005515
Dod01g2575 893 SUPERFAMILY TPR-like 465 768 IPR011990 GO:0005515
Dod01g2575 893 SMART hat_new_1 272 304 IPR003107 GO:0006396
Dod01g2575 893 SMART hat_new_1 521 553 IPR003107 GO:0006396
Dod01g2575 893 SMART hat_new_1 625 660 IPR003107 GO:0006396
Dod01g2575 893 SMART hat_new_1 341 376 IPR003107 GO:0006396
Dod01g2575 893 SMART hat_new_1 666 698 IPR003107 GO:0006396
Dod01g2575 893 SMART hat_new_1 378 411 IPR003107 GO:0006396
Dod01g2575 893 SMART hat_new_1 306 338 IPR003107 GO:0006396
Dod01g2575 893 Gene3D Tetratricopeptide repeat domain 501 803 IPR011990 GO:0005515
Dod01g2575 893 MobiDBLite consensus disorder prediction 107 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2575 Dod-Chr1 64967653 64975800 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2575 K13217 - gmx:100787373 1281.54