Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2554 ATGGCACTTATTTTGGATGTTGCACGGTTTAAGTATCCTCCTCAGTGGGTTCCACTTACACTTCTTTGGGAAGGCATGAACTATATTGTTAAATCCACTGGAAAAACAAGGGGGCTCTTGCTTATATCAAGGCCTCATAGGGAACCCGGCATGCTCTATACTCTGAGCTGCAGACACGAAAGCTGGATTAGCATTGCCATATTCCTAATGGAAGATGTTCCTCTTCTATTACAATCAGATGATGTGAAAGACATTCATAAGGTTCTTTCACTTATAGTCACATCGCTTCCATCTAATTTTGAGGAATTCATCAAGTGGGTTGCAGAGAACAGGAAGCGAGAAATAGAGGGCCCAAGTTTAAGCACAGAAGAGAAAGCAAGGCTTGCTGTCAAGGAAGAGGTATTGAAACAGGTGCAGGAGACAGGTTTTTTCAAACATGTGGCTTCCTTTTTGTCAAATTCTCCTCGAAAATTATGTTGCACTTGCTCTAGCCCCAGTAAGTACATTAACATGTACCCAGATATCATTGATGTGCTAACAGTGCTTCTACTGTCTTTACCACTTACACCATGGTCTGGGATCAAAGATGAGCGGCTTTTGAGGGAAATAGATGGCCTCGTTTCAATCGAAAATCTTCCGGTTTTGCTTCAAGAAGAGGTTCTGCAGTTAAGATGTCAGCTATACCTTCTCAAGAAATGTCAGGAGGGTAAGGTAGAAGAGATTCTTGGTGCGCCTTTCGCTTAG 744 0.4247 MALILDVARFKYPPQWVPLTLLWEGMNYIVKSTGKTRGLLLISRPHREPGMLYTLSCRHESWISIAIFLMEDVPLLLQSDDVKDIHKVLSLIVTSLPSNFEEFIKWVAENRKREIEGPSLSTEEKARLAVKEEVLKQVQETGFFKHVASFLSNSPRKLCCTCSSPSKYINMYPDIIDVLTVLLLSLPLTPWSGIKDERLLREIDGLVSIENLPVLLQEEVLQLRCQLYLLKKCQEGKVEEILGAPFA* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2554 247 SUPERFAMILY Cysteine proteinases 1 43 IPR038765 -
Dod01g2554 247 Gene3D - 1 46 IPR038156 -
Dod01g2554 247 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 2 167 245 - -
Dod01g2554 247 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 47 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Dod01g2554 247 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 1 152 IPR040409 GO:0016756|GO:0046872|GO:0046938
Dod01g2554 247 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 167 245 IPR040409 GO:0016756|GO:0046872|GO:0046938
Dod01g2554 247 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 2 1 152 - -
Dod01g2554 247 Pfam Phytochelatin synthase 2 38 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Dod01g2554 247 Pfam Domain of unknown function (DUF1984) 57 163 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Dod01g2554 247 Pfam Domain of unknown function (DUF1984) 157 227 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2554 Dod-Chr1 64728387 64730126 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2554 K05941 - gmx:100808418 256.144