Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2553 ATGGCAAGCGCAGGTCTTTACCGGAGAGCCCTCCCTTGTCCCCCTGCCATTGAGTTTGCTTCCCCTGAAGGCAAGAAGATCTTTGGTGAAGCTCTTGCTGATGGAACCATGGAGGGTTTCTTCAAGTTAATATCATACTATCAGACACAGTCTGAGCCTGCCTATTGCGGACTCGCCACTCTTGCTGTTGTCCTTAATGCTCTCTCTATTGACCCTGGTAGAAAATGGAAAGGCCCTTGGAGATGGTTCGATGATTCCATATTGGATTGCTGTGAGCCTTTGGACAAAATCAAAGCACAAGGCATTACATTTGGCAAAGTTGCTTGCTTGGCTCGCTGCAACGGAGCTAAAGTTAAAGCCTTTCGCTCAGATGAGAGCTTGATCGATGATTTTCGCAAGCGTGTGATTTCATGCTGTTCTTCTGAGGATTGTCATGTGATTGTGTCGTATCACAGGGGGGCCTTCAATCAGACTGGTACCGGCCATTTTTCACCGATTGGAGGATATCATGCGGAAAGGGATATGGTCTTGATATTGGATGTTGCTCGTTTTAAATATCCTCCTCACTGGGTTCCCCTTACTCTTCTTTGGAATGCCATGAATACCATTGATAATGCAACTGGACATCATAGGGGGTACATGATTATTTCAAGGCTTAACAGGGCACCGTCAATACTTTATACTGTGAGTTGTAGGCATGAAGGTTGGAGCAGTGTTGCCAAATTCTTAACTGAAGATGTCCCTCTCCTTCTAAAGTCAGAGGATTTAAATAACATACAGGGAATACTCTCTGTTGTATTTAAATCTCCTCCTAGTAATTTGAGAGGATTCATCACATGGGTTGCTGAAGTTCGGAGGCAAGAAGATGGGAATCTCACATTGAGTGAGGAGGAGAAAGGAAGGCTAGCTATCAAGGCAGACATACTGGAACAGATTCGGACAACTGCACTCTTTAAACATGTTACCAGGTGGTTGGATTCAGAATGCTCATGTTGCAATACTATTGCAAACCTTGGTGACAAAGATACTTTACCGGCACTTGCTGCTAGCGTTTGTTGCCAAGGGGCAGATCTTTTGAATGATTGTGTTAGGTTAGGTTTGTCAGGTGGAAAATGCTGTAGTCAAATGGATGTAAAACATCTGAACATTGACGGCGAAAATCAAGCAACATTGGTTTCTGGAGCTGTTACTATTGTTGGCAGTAGTGAACAAGGAGTTGATGTTTTGGTCCCTTTGTGTAAAAGAAAGCAGAATATGTTGTGTCTTTCTGATGAAGGTCACTGCATTGGAATGCACCCATCTACTGCAGATGTGTTAACAGTGCTTTTATTGGCACTACCCCTGCATACGTGGTCAGGCATTAAAGACGAAAAGCTGCGTGTGGAAGTTACTAGCCTTCTAACAACTGAAGATCTTCCTCCCTTACTTCAGGAAGAGTCTGAGCTTGGCTATTGTGGTCTCGCCAGCCTATCCATGGCCTTGAACGCTCTTGCCATCGATCCTGGCAGGAAATGGAAAGGACCTTGGAGATGGTTTGATGAATCTATGTTGGATTGTTGTGAACCTCCGGAAAAGGTCAAAGCTAGAGGCATCTCATTCGGGAAACTTGTATGCTTGGCTCATTGTGCTGGAGCAAAAGTTGAACACTTGAACCCTTTCGTGCAAGCCATAGTACCATTGACGATTTTTGTAAATATGTCATCAAGCGTTCAACTTCTGATGAATGTCATGTTATTGCATCATACCACAGAGCTGCTCTCAAACAAGTATGCCCTATGGTTTATGGAACTTTGA 1794 0.4409 MASAGLYRRALPCPPAIEFASPEGKKIFGEALADGTMEGFFKLISYYQTQSEPAYCGLATLAVVLNALSIDPGRKWKGPWRWFDDSILDCCEPLDKIKAQGITFGKVACLARCNGAKVKAFRSDESLIDDFRKRVISCCSSEDCHVIVSYHRGAFNQTGTGHFSPIGGYHAERDMVLILDVARFKYPPHWVPLTLLWNAMNTIDNATGHHRGYMIISRLNRAPSILYTVSCRHEGWSSVAKFLTEDVPLLLKSEDLNNIQGILSVVFKSPPSNLRGFITWVAEVRRQEDGNLTLSEEEKGRLAIKADILEQIRTTALFKHVTRWLDSECSCCNTIANLGDKDTLPALAASVCCQGADLLNDCVRLGLSGGKCCSQMDVKHLNIDGENQATLVSGAVTIVGSSEQGVDVLVPLCKRKQNMLCLSDEGHCIGMHPSTADVLTVLLLALPLHTWSGIKDEKLRVEVTSLLTTEDLPPLLQEESELGYCGLASLSMALNALAIDPGRKWKGPWRWFDESMLDCCEPPEKVKARGISFGKLVCLAHCAGAKVEHLNPFVQAIVPLTIFVNMSSSVQLLMNVMLLHHTTELLSNKYALWFMEL* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2553 597 Gene3D - 16 221 IPR038156 -
Dod01g2553 597 Gene3D - 461 573 IPR038156 -
Dod01g2553 597 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 5 479 - -
Dod01g2553 597 Pfam Phytochelatin synthase 7 213 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Dod01g2553 597 Pfam Phytochelatin synthase 478 552 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Dod01g2553 597 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 429 597 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Dod01g2553 597 Pfam Domain of unknown function (DUF1984) 231 479 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Dod01g2553 597 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 221 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Dod01g2553 597 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 479 549 - -
Dod01g2553 597 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 5 479 IPR040409 GO:0016756|GO:0046872|GO:0046938
Dod01g2553 597 SUPERFAMILY Cysteine proteinases 448 553 IPR038765 -
Dod01g2553 597 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 479 549 IPR040409 GO:0016756|GO:0046872|GO:0046938
Dod01g2553 597 SUPERFAMILY Cysteine proteinases 14 217 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2553 Dod-Chr1 64719551 64727973 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2553 K05941 - gmx:100782042 824.698