Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2538 ATGGATTCAATTCAAGAATTTATGGACACATGTAACTCTGACAACGCCTGCAACCTCACCAGCAACAACACCACCAACAGCTTTGCCGCAACAAGTGCTAGCAGCTCCTCCTCTTCCACCACCACCACCAACAGCAGCAGCCGCTATGAGAACCAGAAGCGCCGTGACTGGAACACCTTCGGCCAGTACCTCAAGAATCACCGACCCCCTTTGTCCCTCTCAAGGTGCAGCGGTGCACATGTCCTTGAATTCCTCCGGTACCTTGATCAATTTGGGAAGACCAAAGTGCACAACCCGATCTGCCCTTTCTATGGGCACCCGAACCCTCCGGCGCCATGTCCATGCCCTCTAAGGCAAGCCTGGGGAAGCCTTGATGCACTGATAGGTCGTCTTCGTGCAGCTTTTGAGGAGAATGGAGGGAAACCGGAAGCCAACCCTTTTGGAGCAAGAGCAGTGAGGCTCTACCTTCGAGAGGTTCGTGATATGCAGTCCAAAGCAAGAGGGATTAGCTATGAGAAGAAGAAGCGCAAGCGTCCACCACAACAACTCCACCAACAACAATCCAATATGGGAGTAGTAGTACCTCGTTTGCCACCACCAGGTGCAACTTAA 612 0.5245 MDSIQEFMDTCNSDNACNLTSNNTTNSFAATSASSSSSSTTTTNSSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHNPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDMQSKARGISYEKKKRKRPPQQLHQQQSNMGVVVPRLPPPGAT* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2538 203 MobiDBLite consensus disorder prediction 166 203 - -
Dod01g2538 203 PANTHER G1-LIKE PROTEIN 1 189 - -
Dod01g2538 203 MobiDBLite consensus disorder prediction 28 52 - -
Dod01g2538 203 Pfam ALOG domain 38 161 IPR006936 -
Dod01g2538 203 ProSiteProfiles ALOG domain profile. 48 175 IPR006936 -
Dod01g2538 203 PANTHER PROTEIN G1-LIKE2 1 189 IPR040222 -
Dod01g2538 203 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2538 Dod-Chr1 64530330 64532796 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2538 - - gmx:100527164 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2538 01 64530330 64532796 Dod07g0872 07 12974992 12976365 PCT
Dod07g0685 07 9470994 9472664 Dod01g2538 01 64530330 64532796 PCT