Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2534 ATGGACAAGCTGAATCTGGGTCAACTGGGTGAGAAGCTGAAGACGGGTGGGGCCCAGATGGGTCGAATGGTGAGCCTGAAAGTGAAGGAAATGCTGCAGGCCCCAACCCCAGAATCGAAGATGGTCGACGATGCCACCTTGGAGACCCTCGAGGAACCTAACTGGGGCATCAACCTCAGGATTTGTGCCATGATCAACAACAACGTTTTCAACGGCTCCGAGGTTGTTAAGGCCATCAAGAGGAAGGTCTCCCACAAGAGCCCCCTGGTCCAGAGGCTCAGCCTTGACCTATTGGAGGCTTGTGCCATGAACTGTGACAAGGTGTTCTCTGAGATCGCTTCTGAGAAGCTTCTTGAAGATTTGGTCGTCAGGCTGGTTGATAACCCTCAGGCTGATCCCCACAATCGGAGAAGGGCGTTTCAGCTTATTAGGGCTTGGGGTGAGTCTGAGGAGCTTGCATATCTTCCTGTGTTTCGTCAAACTTATATGAGTTTGAAAGATAGAGATGAACCACTAGACATAGGAGGGGGAAGTTCACCACACGTTCCGTACACCTTGGAGTCATATATGGATCAACAGCAATTAGATCCTCCTGAAAGCTACCCTATTCCTGAAGCAGGACTCCATGCTATGGATGACTCAGCTTTCTCTTCTGGTCACCAGGACATGTCACCTGAAGAGAAGAAAGAGCTTCTTGTGGTTGCTCGTAACAGTCTTGAATTGCTCTCTAGCATATTAAATTCTGAGGCAGAGCCGAAACCTTTGAAGGAAGATTTAACTGTGAGTTTGTTGGATAAGTGCAAGCAATCACTCTCTGTCATCAAGGGGATTGTGGAAAGCACTACAAATGATGAAGTGACACTTTTTGAGGCTTTAAATCTCAATGATGAGCTGCAACAGTTATTTTCCAAATATGAGGAGTTGGAAGCTGCTCAAAACTCTGGGGCACAACACCCTCCTCAAAATTCTGACACTGAAAATCATGAAGGAGCTGTTCCAAATCCCAACAAACTACCTGAAAGATATGAAGGCGATGAATCCGAAGAGTCTGGAGCTGCCCTCAACCTCGGAAGGAAGCTGCCCAAAAAGTCTAGCACTCTTGAAGTCAATGCAACCGACGGGGATGGTCATGTTGAAATCAAAATAGTAGATAGTCCAAAAGAGGAGGAGGAGGAGTCTAGCCACAAGAGAAATACAGAGTGA 1203 0.473 MDKLNLGQLGEKLKTGGAQMGRMVSLKVKEMLQAPTPESKMVDDATLETLEEPNWGINLRICAMINNNVFNGSEVVKAIKRKVSHKSPLVQRLSLDLLEACAMNCDKVFSEIASEKLLEDLVVRLVDNPQADPHNRRRAFQLIRAWGESEELAYLPVFRQTYMSLKDRDEPLDIGGGSSPHVPYTLESYMDQQQLDPPESYPIPEAGLHAMDDSAFSSGHQDMSPEEKKELLVVARNSLELLSSILNSEAEPKPLKEDLTVSLLDKCKQSLSVIKGIVESTTNDEVTLFEALNLNDELQQLFSKYEELEAAQNSGAQHPPQNSDTENHEGAVPNPNKLPERYEGDESEESGAALNLGRKLPKKSSTLEVNATDGDGHVEIKIVDSPKEEEEESSHKRNTE* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2534 400 Gene3D - 218 312 IPR038425 -
Dod01g2534 400 MobiDBLite consensus disorder prediction 374 400 - -
Dod01g2534 400 SUPERFAMILY GAT-like domain 196 309 - -
Dod01g2534 400 CDD VHS 39 166 - -
Dod01g2534 400 Pfam GAT domain 236 309 IPR004152 GO:0035091|GO:0043130
Dod01g2534 400 Coils Coil 291 311 - -
Dod01g2534 400 SMART VHS_2 38 169 IPR002014 GO:0035091|GO:0043130
Dod01g2534 400 MobiDBLite consensus disorder prediction 310 400 - -
Dod01g2534 400 SUPERFAMILY ENTH/VHS domain 34 168 IPR008942 -
Dod01g2534 400 MobiDBLite consensus disorder prediction 314 330 - -
Dod01g2534 400 Pfam VHS domain 39 148 IPR002014 GO:0035091|GO:0043130
Dod01g2534 400 PANTHER TOM1-LIKE PROTEIN 2 1 389 - -
Dod01g2534 400 Gene3D - 29 175 IPR008942 -
Dod01g2534 400 ProSiteProfiles VHS domain profile. 45 173 IPR002014 GO:0035091|GO:0043130
Dod01g2534 400 PANTHER TOM1-LIKE PROTEIN 1 1 389 IPR044836 GO:0035091|GO:0043130|GO:0043328
Dod01g2534 400 ProSiteProfiles GAT domain profile. 223 310 IPR004152 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2534 Dod-Chr1 64473907 64477856 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2534 - - gmx:100803803 541.962