Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2498 ATGCAGAGAGAAATTACGCAGATCATTGTAGCCTCGTCTGTTGGGTTGATATTTGCCGTAGCCGTGCATTATCGCTTAAAACAGATGAGACATCGAAAGATCATCCCTCGTTTAAAATTATCACGATCAGGCCATGCCCCAAAGCTTGAAAGCTTCTCCCATTACGTAGCTAGGCAAATGGGGTTCAAAGATAGGAGGAGTTGTCCTCAGCTTTGTAGATTGGCTTCCGAATACGTAAGCAAATACGAGGGATACGAAGCTGATATATACGCCTTCTTCGAGAATGAACCAGATGCGGATTCACTTTACGTGAAGCTCGTGGAGGAGTTTGAAAGATGCATACTTAGTTACTTTGGGTTCCATTGGAGCCATGCCGATATAATGATAAGTCAGATCTTGAGCTCTGAACTTGAACCGAAAAAGAAGTTCAAGCACATAGTTATGGCAGCAACTAGGCATCATTCTTTGCGCAGGGAACAAAGGATCGAGAGTGTAACTAAGAACCTTAAGGTGGCAAGAGTTTTTAACACACTAGTAGAAGAGATGAAAGCAATGGGGCTTGCAGCAACTGATGACTCTCAATGTACAGAGGTGATGGCTCCAGTAGCTCACAGTGATAGGAGCCCAGTGCTCCTCTTCATGGGTGGAGGTATGGGAGCTGGCAAGAGCACGGTGCTAAAGGAGATTCTCAAAGAACCTTTCTGGGCAGGAGCAGCAGGGAATGCCGTAGTAATTGAGGCAGACGCCTTTAAAGAATCAGACGTCATCTATAAGGCGCTCAGCTCAAGAGGGCATCATCACGACATGATTCGAACAGCTGAACTGGTGCACCAATCATCCACAGATGCAGCCTCATCCCTCCTCGTAACAGCACTAAACGAGGGGCGGGATGTAATCATGGACGGCACGTTCTCCTGGGTACCATTTGTTGTGCAGACAGTAACAATGGCCAGAAATGTCCATCGCCGCCGCCACCGCATGGGACCTGGCTATAGAGTGAATGGGGATGGAACTGTAACTGAAAACTACTGGGAAAGAACAGAAGATGAAGAACCTGAACAGGTTGGAGGCAAAAAGAGAAAACCATATAGGATAGAGTTGGTTGGCGTGGTATGTGATGCTTACCTCGCAGTTGTTAGAGGCATAAGGAGAGCTATCATGTCTCGAAGAGCAGTGAGAGTAAAGTCACAATTGAAATCCCACAAGCGGTTTGCAGATGCATTTATGACTTACTGTCAACTAGTAGACAATGCCCGGCTATACTGCACTAATGCCTTGGAAGGCCCACCAAAGTTGATAGGATGGAAAGAAAGAGACAAGACACTGCTCGTTGATCCAGATGAAATCGACTGTTTGAAAAGGGTTGCTACCTTGAATGAAGATGCCGACACCATATACGAACTTTACAAGCACCCCAACCCAGCTTGTGAAGCTGGATCAGCATGGAAAGACATTGTCTTATCTCCTTCAAGGTTGGACATCCAACAAGAGCTCAAGTATTCAATCCAAAATATTGAGAGCATGAAATGA 1530 0.4588 MQREITQIIVASSVGLIFAVAVHYRLKQMRHRKIIPRLKLSRSGHAPKLESFSHYVARQMGFKDRRSCPQLCRLASEYVSKYEGYEADIYAFFENEPDADSLYVKLVEEFERCILSYFGFHWSHADIMISQILSSELEPKKKFKHIVMAATRHHSLRREQRIESVTKNLKVARVFNTLVEEMKAMGLAATDDSQCTEVMAPVAHSDRSPVLLFMGGGMGAGKSTVLKEILKEPFWAGAAGNAVVIEADAFKESDVIYKALSSRGHHHDMIRTAELVHQSSTDAASSLLVTALNEGRDVIMDGTFSWVPFVVQTVTMARNVHRRRHRMGPGYRVNGDGTVTENYWERTEDEEPEQVGGKKRKPYRIELVGVVCDAYLAVVRGIRRAIMSRRAVRVKSQLKSHKRFADAFMTYCQLVDNARLYCTNALEGPPKLIGWKERDKTLLVDPDEIDCLKRVATLNEDADTIYELYKHPNPACEAGSAWKDIVLSPSRLDIQQELKYSIQNIESMK* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2498 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 333 IPR027417 -
Dod01g2498 509 Pfam Zeta toxin 203 313 IPR010488 GO:0005524|GO:0016301
Dod01g2498 509 Gene3D - 191 431 IPR027417 -
Dod01g2498 509 PANTHER UNCHARACTERIZED 4 509 IPR044802 -
Dod01g2498 509 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 4 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2498 Dod-Chr1 63990132 63994574 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2498 - - gmx:121172610 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2498 01 63990132 63994574 Dod07g0637 07 8506923 8510868 PCT