Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2490 ATGAAGCAGATTCGACGGTGGCAGAGGACTCTGATCCTCGCTCTGCTCTCTCTCTCCGTCCTCGCTCCTCTCGTCTTCGTCTCTCACAGGCTCAAAGTCCTCACTCCCGACGGAAGAAGAGAGTTTCTTGATGATTTGTCGAGTGTCACGTACAGGACAGATCCTTTGAAGTTGAATGCTATAGAACAGGAAGGCGCTGAAGAGTTAGAAGAACCAAAGCAGGTTGTTTATAGAGAAAATGATTTTGGTTCAACAATTTGGAACAATTCAGACACAATTGATGGTTTGGAGGAGTCTATAATTGAGGGGAGCAAAAGTAACCTTTTGGAAATAAATGAAGTAGAACATGACGAGAGACAAATACAGGAAGCTCAGCAGAAAGGATCATCCTCCATGGATGGAAATAAGGAGAAATCTGATTCAAAAGGTATGCGGAATCAGAATATATTCACCCACCCTCAAAGAATGACAGATGAAAATATTGAAGTAATAAATAAGCAATCTGATCGAAAAGCAAGTCAACGTCATCAGATTTCACAATCTCAATCCCATGAAATGAGAAATCAGAAGGTTGAAGAGATTAAGGATCAAATTATTAGAGCCAGAGCATACTTGAGCTTTGCTCCACCAAGCAGCAACTCTCACTTGGTCAAGGAGTTGAAGCTGCGAATAAGAGAGATGGAACATGCAGTTAGAGAAGCCACCCAGGATTCAGATCTTTCAAGGAGTGCTTTGCAGAAAATGAGGCGCATGGAGGCTACACTATCTAAAGCCCACCGAGCTTTTCCAGACTGCTCTGCTATGGCTGCTAAGCTCCGTGCAATGAATCTTAATGCTGAAGAGCAACTTCGTTCTCAGCGATATCAAGAAACGTATCTTGTTCATCTTGCTGCAAGGACCACCCCAAAAGGTCTTCACTGCCTTTCTATGCAGCTGACTGCTGATTACTTTGCCCTCATTCCTGAGGAGAGGAAATTCCCAAATGAAAACAATATTCATGACCCACGACTTTATCATTATGCTGTCTTCTCTGACAATGTTCTAGCATGTGCAGTGGTTGTTAACTCTACTGTCTCTACTGCCAAGGAGGAGGAGAAACTTGTTTTCCATGTAGTGACCAATTCACTCTACTTTCCAGCAATCTCAATGTGGTTCTTATTAAACCCTCCTGGCAAAGCCACAATCCACATACAGAGCATAGATAACTTTGAATGGTTGTCCAAGTACAACACCTTCAAGAAATATAATTCTAATGATCTGAGATATACTTCTGAATTGAACTACCTCCGCTTCTACATGCCAGAAATCTTCCCTGCTCTAAATAAGATTGTGCTCTTTGACCATGATGTGGTGGTGCAACAAGATCTTAGTCAATTATGGAATGCTAATATGAATGGAAAAGTAATTGCAGCAGTTGGGACTTGTGAGGAAGGTGAAACTTCATTTCATAGGATGGATATGTTCATAAACTTCTCAGATCCATACATTGCCAAGAGGTTTGATGCCAATGCCTGCACATGGGCATTTGGGATGAATTTGTTTGATTTGCAACGGTGGAGGAGACATAATTTAACTGCTGTCTACCACAAATATCTGCAAATGGGTTCTAAGAGGCCATTGTGGAACATTGGAAGTCTTCCAATAGGCTGGCTCACCTTCTATAACAAGACAATGGTTTTGGACAGACGGTGGCATGTTCTTGGCCTTGGTTATGATTCGGGTGTTGATAGAAATGAGATCAAGCGGGCTGCCGTTATACACTATGATGGAATTAGGAAGCCATGGTTGGATATTGCGATGGGAAGATACAAGAGTTATTGGACCAAATTTGTGAATTATGATCACCCATTTTTGCAACGGTGCAATCTGCAGGCGTAG 1878 0.4212 MKQIRRWQRTLILALLSLSVLAPLVFVSHRLKVLTPDGRREFLDDLSSVTYRTDPLKLNAIEQEGAEELEEPKQVVYRENDFGSTIWNNSDTIDGLEESIIEGSKSNLLEINEVEHDERQIQEAQQKGSSSMDGNKEKSDSKGMRNQNIFTHPQRMTDENIEVINKQSDRKASQRHQISQSQSHEMRNQKVEEIKDQIIRARAYLSFAPPSSNSHLVKELKLRIREMEHAVREATQDSDLSRSALQKMRRMEATLSKAHRAFPDCSAMAAKLRAMNLNAEEQLRSQRYQETYLVHLAARTTPKGLHCLSMQLTADYFALIPEERKFPNENNIHDPRLYHYAVFSDNVLACAVVVNSTVSTAKEEEKLVFHVVTNSLYFPAISMWFLLNPPGKATIHIQSIDNFEWLSKYNTFKKYNSNDLRYTSELNYLRFYMPEIFPALNKIVLFDHDVVVQQDLSQLWNANMNGKVIAAVGTCEEGETSFHRMDMFINFSDPYIAKRFDANACTWAFGMNLFDLQRWRRHNLTAVYHKYLQMGSKRPLWNIGSLPIGWLTFYNKTMVLDRRWHVLGLGYDSGVDRNEIKRAAVIHYDGIRKPWLDIAMGRYKSYWTKFVNYDHPFLQRCNLQA* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2490 625 MobiDBLite consensus disorder prediction 144 161 - -
Dod01g2490 625 CDD GT8_like_1 338 612 - -
Dod01g2490 625 PANTHER HEXOSYLTRANSFERASE 1 624 - -
Dod01g2490 625 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 1 624 IPR029993 GO:0047262
Dod01g2490 625 Coils Coil 217 237 - -
Dod01g2490 625 MobiDBLite consensus disorder prediction 118 189 - -
Dod01g2490 625 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 340 616 IPR029044 -
Dod01g2490 625 SUPERFAMILY Nucleotide-diphospho-sugar transferases 338 622 IPR029044 -
Dod01g2490 625 Pfam Glycosyl transferase family 8 307 599 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2490 Dod-Chr1 63861985 63868258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2490 1 625 Glycosyltransferase AT1G06780 51.406 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2490 K13648 - gmx:100793193 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2490 01 63861985 63868258 Dod07g0626 07 8388510 8394843 PCT