Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2489 ATGGCAACCATCTTTGCTAGCACCACAACACCATCAATCACCCGCGCAGGTCTTGTGCACAAGCGATCTCTTGGGGTCTCATCCTCTACAGTTCTTGGGTTGCCAGCAATGGCTAAGGTGGGAAGAGTGAGGTGCTCCATGGAGGGAAAGCCTTCTGTGCGGGAAAGCAGGTCCAACATGGGGATGGGGGCGTCATTGATGGCTGCTGCTTTGGCTGCAGCCATGTCCAGCCCGGCCATGGCTTTGGTGGATGAGAGACTGAGCACTGAAGGAACAGGTCTTCCTTTTGGGCTTAGCAACAACCTCCTTGCTTGGATCCTGTTCGGTGTCTTTGGTCTTATATGGGCTCTCTACTTTATCTACACTTCTAGTCTTGAAGAGGATGAGGAGTCTGGACTGTCCCTCTAA 408 0.527 MATIFASTTTPSITRAGLVHKRSLGVSSSTVLGLPAMAKVGRVRCSMEGKPSVRESRSNMGMGASLMAAALAAAMSSPAMALVDERLSTEGTGLPFGLSNNLLAWILFGVFGLIWALYFIYTSSLEEDEESGLSL* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2489 135 Pfam Photosystem II reaction centre W protein (PsbW) 1 135 IPR009806 GO:0009507|GO:0009523|GO:0015979
Dod01g2489 135 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 135 IPR009806 GO:0009507|GO:0009523|GO:0015979
Dod01g2489 135 PANTHER PHOTOSYSTEM II REACTION CENTER W 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2489 Dod-Chr1 63860523 63861161 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2489 K02721 - gmx:100306223 164.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2489 01 63860523 63861161 Dod07g0624 07 8379289 8381649 PCT