Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2486 ATGGCGACTACATCGATCACAAACATGCTCATTGCCTTCCAACCCAGCAACAATCACCCGAGACTGATCCAAGCACCACCATCACTATTATCTCTCACCCAAGACCGCCCAACCCGAATAACCACCACAAGAAAACCCACATCCACAATATGCAAGGCCACCAACACCAACTCCTCGTTAACCTCCACCATCACAGAACTCCAAACACAACAACAAGAGCAGCAAATACCAGAAACACCCTCACCCCCAAAACAACCACAACCAGACATATCCTCTGTGTGGCGCAAGCTCCACGGCGAGGACAACTGGGCCGGGCTTCTGGACCCAATGGACCCCCGCATGCGGGCCGAGCTGATCCGCTACGGGGAGATGGCCCAGGCCTGCTACGACTCCTTTGACTTCGACCCTTACTCCAAGTACTGCGGCAGCTGCAGGTACCCACTGGACTCGTTCTTCGAGTCCCTCGATTTGACCCATTTAGGGTACACCACGACGCGCTACCTCTACGCGACGGCGAACATCAACCTTCCCAAGTTCTTCAGGATGTCTCGGTGGCCGCACAAGATGTGGAGCGAGAGGGCCAACTGGGCGGGGTACGTCGCCGTTTCGGATGACGACACGAGCAGGAAGCTGGGGAGGAGGGATATTGCGATTGCGTGGAGGGGGACGGTGACGCACGTGGAGTGGGTGTCGAACCTGTTGAACTACCTGAGGTCTGTCTCGCCGGAGATCCCTTGCCCCGACGGGGATGTCAAGGTGGAGGCCGGCTTCTTGGATCTCTACTCTGATAAGGACAAGAGCTGCCCTTACTGCAAGTACTCTGCCAGACAGCAGGTCCTTTCGGAAGTGAAGCGGTTGGTGGAGAAGTACCAAGACGAGGAAATAAGTGTTACGATAACTGGGCATAGCTTGGGGAGCGCGTTGGCCTTATTGAGTGCCTTTGACATAGCGGAAACAGGGTTGAACGTGAAGAAAGATGGGAGTGGCGTGCATGTGTCGGCTGTAACGTTCTCGGGGCCGAGGGTGGGGAACTGGAGATTCAAGGAGAGGTTGGAGTCTGAGCACGGGGTGAGGGTGCTTAGGGTTCACAACACTCATGACATGGTGCCCAAGTCGCCAGGGTTCTTCATCAACGAGACTTCGCCACCGTGGCTCTTCAAGCTGGCACAGGGCTTGCCTTGGAGTTACACCCATGTTGGGGTCGACTTGGAGTTGGACCACAAGAAATCGCCCCACTTGAATCCCAATGGTGATAGTGTTTGTGCCCATAACTTGGAGGCTCATTTGCATTTGCTCGACGGATACCACGGGAGCAATCGTGAATTTGAGTCAACGACTGGGAGGGACGTTGCTTTGGTGAACAAGGACTGTGACTTTCTGAAAGATGAACAGTGTGTGCCACCAACGTGGAGGCAAGATTTGAATAGGGGCTTGGTCAGGGGCCCAGATGGACGGTGGATGCAGGCTGAGCGCCCAAGGCTTGTTGATCACCCGGAAGATATTGATCACCATCTCAAGCAACTGGGCCTTGCTTCATCTGAGAGTTGA 1548 0.5491 MATTSITNMLIAFQPSNNHPRLIQAPPSLLSLTQDRPTRITTTRKPTSTICKATNTNSSLTSTITELQTQQQEQQIPETPSPPKQPQPDISSVWRKLHGEDNWAGLLDPMDPRMRAELIRYGEMAQACYDSFDFDPYSKYCGSCRYPLDSFFESLDLTHLGYTTTRYLYATANINLPKFFRMSRWPHKMWSERANWAGYVAVSDDDTSRKLGRRDIAIAWRGTVTHVEWVSNLLNYLRSVSPEIPCPDGDVKVEAGFLDLYSDKDKSCPYCKYSARQQVLSEVKRLVEKYQDEEISVTITGHSLGSALALLSAFDIAETGLNVKKDGSGVHVSAVTFSGPRVGNWRFKERLESEHGVRVLRVHNTHDMVPKSPGFFINETSPPWLFKLAQGLPWSYTHVGVDLELDHKKSPHLNPNGDSVCAHNLEAHLHLLDGYHGSNREFESTTGRDVALVNKDCDFLKDEQCVPPTWRQDLNRGLVRGPDGRWMQAERPRLVDHPEDIDHHLKQLGLASSES* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2486 515 PANTHER PHOSPHOLIPASE A1 4 509 - -
Dod01g2486 515 MobiDBLite consensus disorder prediction 64 91 - -
Dod01g2486 515 Pfam Lipase (class 3) 218 375 IPR002921 GO:0006629
Dod01g2486 515 Gene3D alpha/beta hydrolase 93 501 IPR029058 -
Dod01g2486 515 SUPERFAMILY alpha/beta-Hydrolases 190 435 IPR029058 -
Dod01g2486 515 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 4 509 - -
Dod01g2486 515 MobiDBLite consensus disorder prediction 64 78 - -
Dod01g2486 515 CDD Lipase_3 172 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2486 Dod-Chr1 63829546 63834791 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2486 90 510 Acyl Lipid Metabolism Gene Families AT2G30550 61.358 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2486 - - gmx:100815007 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2486 01 63829546 63834791 Dod07g0623 07 8366987 8371497 PCT