Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2484 ATGCAACACTTCCACCCTCATCCCGCCTCCTCCTCTGCCGCAAACTGCGCTGGCGACTCCGCGGCGGCAGGTTCCGACATAAAGCGCTGCAAGAAGCGCGGCAGTTACAACTGCGGCCGCTGCGGCCTCCCAAAGAAAGGCCACAACTGCAACGTCAAAACACCTTCCTCCCCTTCCCATTCTTCTCTCTCGACCTTCTCCTCCGCCGTTTCCGCCGCTCCTTCTTCCGCATCCGTGACGGTGCGCCAGCCTCCGTCTCACCTCCGCCGTGCGCTGTCGTTCGACGACGCCGCCGGTTTGGATTTGACGACGGATCCTGCCGATGGAGAGGCCGGAGATACATTTCCCGATCCGGATCCGGATCTGGATTCCGATTCGTGCGGGTTACCGGTGAGCCTTCTTTGGGAAGTGCTGAGGAGGCTGCCGCCGGGGGGATTGTTGTCGGCTGCGAGGGTTTGTAAAGGATGGAGGGAGACGACAAGGAGGCTATGGAGGGCGGCGGAGGAGTTGAAGCTTAGGGTTTCGGCGAGTGTTCAGGTAGGATTTGTGGCATCGATGCTGCAGAAGTGCCCGGCGATTGTGAGGCTCTCTCTGAGGATGGAAAGTGATCTGGACTCAACGATGCTGGCTTGCATTGCATTCTCATGCCCCAATCTGGAGTTCATGGAGATCTCGACTTCCGATACCGCGATCAGTCGGATCAATGGGGATGAGTTAGGTCGATTTGTCACTGATAAGAAAAGCCTCAGAAGCCTCAAGATGGAAGGTTGTTGTAATCTCGGGGGTCTAGTTCTTAGTTCGTCTAGTCTCTCTACGCTTTGGCTTTCAAATTTGTACTCTCTTTCTAAGATGGTCTTTAATTGTCCCCAGTTAAGAGAGATTTCCTTGGAATTTTCTCGTCAAGAAAATGATGGTACTGATCTCAAAACTATGGTAGAAGGGTTGGGAAGAAGTTGCCCGAGATTGCAAAACATACACGTATCTTCAACGCGCCTTTCTCATGCTGCTGTGCTTGCTCTTACGGCTGCGCAATTAAGGGGGCTGCGAATGCTTTCACTTGTTCTTGGCTCTGAAATTACCGATGCATCTGTTGCTGCAATTGCTTCTAGCTATCCGAATTTGGAATTGCTTGATCTCAGTGGATCTGGCATAAGTGACAGTGGCATTGGAATGATTTGCAACGTGTTCTCTGAAACCCTGACAAGACTCCTTCTAGCTATTTGCCCTAATGTGTCTTCAAGTGGCATTCAATTTGCTACGGCTCAATTGCCGCACCTTGAACTTATGGACTGTGGCATGACCATATGTGATCCTAATTCCCACAATCCAATTTCTGATGAGAATAACTGCAATTTACAACGAACAACCGTTGCTAATGGTCTTCTTACAAACCAAAAGCTAATCATCAAACATAGCCGTTTAAAGAAACTTAGTTTATGGGGTTGCTCTGGCTTGGATGCTCTATATTTAAACTGCCCACAACTCAATGATCTGAATCTAAATTCTTGCACAAATTTGCATCCAGAGAGACTGTTGCTTCAGTGCCCTAGTTTGGAAAATGTGCACGCATCTGGTTGTCAGGATGTTCTAATTGTGGCTATCCGAAGTCAGGTGTGCAATGCTTCAGCTGCCATGGAAAATCTTTCACTTTGTAAGCGGTTACCTGATGGCTCCAAAAGGATTCGGGTTCCTCATTTACTCGGTGGCGAGTCACCTGATGATGAAAAGAAACGGAGGAGAACTGAGAGACGGCTTTGTAACGTGGCTGTGAACTGA 1776 0.4961 MQHFHPHPASSSAANCAGDSAAAGSDIKRCKKRGSYNCGRCGLPKKGHNCNVKTPSSPSHSSLSTFSSAVSAAPSSASVTVRQPPSHLRRALSFDDAAGLDLTTDPADGEAGDTFPDPDPDLDSDSCGLPVSLLWEVLRRLPPGGLLSAARVCKGWRETTRRLWRAAEELKLRVSASVQVGFVASMLQKCPAIVRLSLRMESDLDSTMLACIAFSCPNLEFMEISTSDTAISRINGDELGRFVTDKKSLRSLKMEGCCNLGGLVLSSSSLSTLWLSNLYSLSKMVFNCPQLREISLEFSRQENDGTDLKTMVEGLGRSCPRLQNIHVSSTRLSHAAVLALTAAQLRGLRMLSLVLGSEITDASVAAIASSYPNLELLDLSGSGISDSGIGMICNVFSETLTRLLLAICPNVSSSGIQFATAQLPHLELMDCGMTICDPNSHNPISDENNCNLQRTTVANGLLTNQKLIIKHSRLKKLSLWGCSGLDALYLNCPQLNDLNLNSCTNLHPERLLLQCPSLENVHASGCQDVLIVAIRSQVCNASAAMENLSLCKRLPDGSKRIRVPHLLGGESPDDEKKRRRTERRLCNVAVN* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2484 591 SUPERFAMILY F-box domain 128 167 IPR036047 GO:0005515
Dod01g2484 591 Gene3D Ribonuclease Inhibitor 167 299 IPR032675 -
Dod01g2484 591 Pfam F-box-like 129 165 IPR001810 GO:0005515
Dod01g2484 591 MobiDBLite consensus disorder prediction 1 20 - -
Dod01g2484 591 SUPERFAMILY RNI-like 209 527 - -
Dod01g2484 591 MobiDBLite consensus disorder prediction 566 581 - -
Dod01g2484 591 MobiDBLite consensus disorder prediction 1 18 - -
Dod01g2484 591 ProSiteProfiles F-box domain profile. 123 167 IPR001810 GO:0005515
Dod01g2484 591 MobiDBLite consensus disorder prediction 562 581 - -
Dod01g2484 591 MobiDBLite consensus disorder prediction 102 121 - -
Dod01g2484 591 Gene3D Ribonuclease Inhibitor 300 443 IPR032675 -
Dod01g2484 591 Gene3D Ribonuclease Inhibitor 444 568 IPR032675 -
Dod01g2484 591 Gene3D - 126 166 - -
Dod01g2484 591 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 28 590 - -
Dod01g2484 591 PANTHER F-BOX/LRR-REPEAT PROTEIN 17-LIKE ISOFORM X1 28 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2484 Dod-Chr1 63796023 63801739 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2484 - - gmx:100819793 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2484 01 63796023 63801739 Dod01g2484 01 63796023 63801739 ECH