Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2475 ATGGCTATTGCCCTCAAATCAGCTTGCTTCTTGCAATTGAAGAAACCTGAGGTCAATTTCCAGGTTTGTTTTCCCTCCAAGAAAGTGGTTTCAGTGAAGAGATACACTCCCGTGGCCGCTATCAGGACAATGGAAACAGTTGGGCTGGCTGAAACATTCACCAGACTGAAAGAACAAGGAAAAGTGGCTTTCATCCCATACATCACAGCTGGTGATCCTGACCTTTCCACCACAGCAGAAGCACTGAAAGTGCTTGATTCATGTGGGTCTGACATAATTGAGCTAGGAGTTCCATACTCTGATCCTTTGGCAGATGGTCCTGTTATCCAGGCTGCTGCTACTCGTTCTTTAGCAAGGGGAACCAATTTTAATGCTATTATTTCTATGTTGAAGGAGGTTGTTCCACAATTGTCTTGTCCAATTGCATTATTTACTTATTACAATCCGATACTGAGGCGTGGTACTGAGAGATTTATGTCTATCGTAAGAGACAGTGGTGTACATGGGCTTGTAGTTCCAGATGTTCCTCTGGAAGAGACAGAAACCTTAAGGGCAGAAGCAAAGAAGAATGGAATTGAACTGGTACTCTTGACAACACCCACCACTCCAACAGACCGAATGAAAGCCATTGTTGATGCTTCAGAAGGATTTGTATATCTTGTGAGCTCAGTGGGGGTCACGGGAGCCCGAGCATCAGTTAGTGAGAAGGTTGAGGCTCTTTTGCAGGGAATCAAACAGGCAACAGATAAGCCAGTAGCAGTTGGTTTTGGAATATCAAAGCCTGAGCATGTGAAACAAGTAGCAGGATGGGGGGCAGATGGTGTGATTGTTGGCAGTGCAATAGTGAAGTTGCTTGGTGAGGCTAAATCTGCTGAAGAAGGATTGAAAGAACTGGAAAACTTCACCCGCTCTTTAAAATCAGCACTTCCTTGA 933 0.4469 MAIALKSACFLQLKKPEVNFQVCFPSKKVVSVKRYTPVAAIRTMETVGLAETFTRLKEQGKVAFIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAIISMLKEVVPQLSCPIALFTYYNPILRRGTERFMSIVRDSGVHGLVVPDVPLEETETLRAEAKKNGIELVLLTTPTTPTDRMKAIVDASEGFVYLVSSVGVTGARASVSEKVEALLQGIKQATDKPVAVGFGISKPEHVKQVAGWGADGVIVGSAIVKLLGEAKSAEEGLKELENFTRSLKSALP* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2475 310 Hamap Tryptophan synthase alpha chain [trpA]. 59 308 IPR002028 GO:0004834|GO:0006568
Dod01g2475 310 PANTHER TRYPTOPHAN SYNTHASE, ALPHA CHAIN 45 309 IPR002028 GO:0004834|GO:0006568
Dod01g2475 310 Pfam Tryptophan synthase alpha chain 53 308 IPR002028 GO:0004834|GO:0006568
Dod01g2475 310 Gene3D Aldolase class I 48 310 IPR013785 -
Dod01g2475 310 SUPERFAMILY Ribulose-phoshate binding barrel 49 290 IPR011060 -
Dod01g2475 310 TIGRFAM trpA: tryptophan synthase, alpha subunit 53 306 IPR002028 GO:0004834|GO:0006568
Dod01g2475 310 ProSitePatterns Tryptophan synthase alpha chain signature. 93 106 IPR018204 GO:0004834
Dod01g2475 310 CDD Tryptophan_synthase_alpha 63 306 IPR002028 GO:0004834|GO:0006568
Dod01g2475 310 PANTHER TRYPTOPHAN SYNTHASE ALPHA CHAIN 45 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2475 Dod-Chr1 63734227 63739607 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2475 K01695 - gmx:732610 516.153