Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2471 ATGCCTTTTGCGATGAAGGTTCAGCCGATTGATTCCGATGTAGGTGCGGAGCTGGTGAAGCCTGTAGCCAAGTCACGGTTGAAGCGGCTCTTCGAGCGCCAGTTGTTCTCCGGCGTTCTCCGGAACTCTGCGGCGGAGAAGCTCGCCGGCGAGGAAGCGCACTCCGGTGTCGGCAACGGATGCACCGATTTGGAGCCGAGCTCGGTGTGCCTGGCGAAGATGGTGCAGAATTTCATGGAAGAGAATCACGAGAAGAACTCCGTTTCCGTCAGGTGTTCCCGTAACCGCTGTAACTGCTTCAACGGAAACTGCGACGACAGCTCCGACGCCGAATCAAACGGTTTCGGTGAATCATCAAACCACCGTTCCTCCTCCGGCGAAGCTCTCGAAATCCTCAAGGGTTTGGTGGCATGTGTGAGCGTGTGCGAGAGGAATTTGCTAGCGGACACTGCGAAGATCGTTGAGAATAACAAGATAATCTGCAAGCGGAAAGACAGTGCCTGCAGAGAGGTTGTTACTGAAGGCTTGTTGGCTCTCGGATACGATGCTTCCGTCTGCAAATCTCGCTGGGAAAAATCCCCTTTCTCTCCTGCCGGGGAATATGAGTACATTGATGTGATGATTGGGGACGAGCGGGTGCTAATTGACGTTGATTTCAGATCGGAATTCGAGATTGCTCGACCAACGAAGGCTTACAAGGCGATCCTTCAAACTCTTCCTTACATATTTGTCGGAAAGTGCGATCGGTTGCAGAGTATTGTGGCCATCGTGTGTGAGGCGGCGAAGCAGAGTCTGAAGAAGAAGGGCATGCACGTTCCGCCGTGGAGGAAGGTGGAATACGGCAAAGCGAAATGGCTCTCTCCTCACTCGCGAACCACCACACCCGCGGTGGTTTCCTCGCATGGGATCAGAGAGGACCCAAAGGAGGAGCAGAATTTGATGGGAAATAATAACGGTGAAGAGTTGGATGGGTCGAAGGTGGTGATACAAGTGAAACCGACGGAGTTGAAACCCAAGAGCTCACTATCTGCTTTGGCTGTTGTGTTCAATGAAAATTGA 1059 0.5269 MPFAMKVQPIDSDVGAELVKPVAKSRLKRLFERQLFSGVLRNSAAEKLAGEEAHSGVGNGCTDLEPSSVCLAKMVQNFMEENHEKNSVSVRCSRNRCNCFNGNCDDSSDAESNGFGESSNHRSSSGEALEILKGLVACVSVCERNLLADTAKIVENNKIICKRKDSACREVVTEGLLALGYDASVCKSRWEKSPFSPAGEYEYIDVMIGDERVLIDVDFRSEFEIARPTKAYKAILQTLPYIFVGKCDRLQSIVAIVCEAAKQSLKKKGMHVPPWRKVEYGKAKWLSPHSRTTTPAVVSSHGIREDPKEEQNLMGNNNGEELDGSKVVIQVKPTELKPKSSLSALAVVFNEN* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2471 352 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 170 292 IPR006502 -
Dod01g2471 352 PANTHER RNA POLYMERASE SUBUNIT BETA-BETA PROTEIN, PUTATIVE (DUF506)-RELATED 22 348 - -
Dod01g2471 352 Pfam PDDEXK-like family of unknown function 73 291 IPR006502 -
Dod01g2471 352 PANTHER OS03G0796600 PROTEIN 22 348 IPR006502 -
Dod01g2471 352 MobiDBLite consensus disorder prediction 291 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2471 Dod-Chr1 63691145 63693463 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2471 - - ahf:112754473 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2471 01 63691145 63693463 Dod07g0608 07 8175662 8178113 PCT