Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2463 ATGGCACCGGATGCACTGTCACAAGATCATATTGCTGAATTCAAAGAAGCCTTTAGCCTCATTGACAAGGACTCTGACGGATTCATTACTGTGGACGAATTGGCAACCATTATCCGATCATTAGATGGGAATCCAACTACAGAAGAAGTCCGAAATATGATCAGTGAAGTTGACATTAGTGGGAATGGGAGAATAGGTTTTGAAGAGTTCTTGAATATTATGGGTAGGAAGAAGAAGGAGGATCTGGCTGAGGAGCTAAAAGAAGCATTCAGAGTATTTGATAGAGATCAAGATGGATACGTATCAGCCACGGACGTAATTAAACATGCCATCATGCAGATCATTTTGCATTTTTTTTCCAATTTTCATATATTGGGGATGCTTGCATCACAACAATATAATTGCTTTAATCAAGGCTCATTTATTTGGATTTCATTTAAAGAAATATATATTTTTTTATAA 462 0.3658 MAPDALSQDHIAEFKEAFSLIDKDSDGFITVDELATIIRSLDGNPTTEEVRNMISEVDISGNGRIGFEEFLNIMGRKKKEDLAEELKEAFRVFDRDQDGYVSATDVIKHAIMQIILHFFSNFHILGMLASQQYNCFNQGSFIWISFKEIYIFL* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2463 153 PANTHER CALMODULIN-LIKE PROTEIN 9 3 111 - -
Dod01g2463 153 ProSitePatterns EF-hand calcium-binding domain. 94 106 IPR018247 -
Dod01g2463 153 SUPERFAMILY EF-hand 6 109 IPR011992 -
Dod01g2463 153 CDD EFh 13 74 IPR002048 GO:0005509
Dod01g2463 153 Pfam EF-hand domain pair 13 74 IPR002048 GO:0005509
Dod01g2463 153 ProSitePatterns EF-hand calcium-binding domain. 58 70 IPR018247 -
Dod01g2463 153 ProSiteProfiles EF-hand calcium-binding domain profile. 9 44 IPR002048 GO:0005509
Dod01g2463 153 ProSiteProfiles EF-hand calcium-binding domain profile. 81 116 IPR002048 GO:0005509
Dod01g2463 153 ProSitePatterns EF-hand calcium-binding domain. 22 34 IPR018247 -
Dod01g2463 153 SMART efh_1 85 113 IPR002048 GO:0005509
Dod01g2463 153 SMART efh_1 49 77 IPR002048 GO:0005509
Dod01g2463 153 SMART efh_1 13 41 IPR002048 GO:0005509
Dod01g2463 153 Gene3D - 1 51 - -
Dod01g2463 153 Gene3D - 52 112 - -
Dod01g2463 153 PANTHER CALCIUM BINDING PROTEIN 3 111 - -
Dod01g2463 153 Pfam EF-hand domain 85 109 IPR002048 GO:0005509
Dod01g2463 153 ProSiteProfiles EF-hand calcium-binding domain profile. 45 80 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2463 Dod-Chr1 63590034 63591850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2463 6 108 EF-hand Containing Proteins AT3G22930 62.500 1.88e-41 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2463 K02183 K13448 gmx:100527005 162.54