Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2451 ATGAGGACTTTCTTCACTGCTGATTCCTGTAAAGAACCGCACCCAAATGCCTTAAATCCTCAGTCTTGGTTCCAGATTGAAAGAGGGAAGCTTCCCAAACTATCTTCAAAGTCCTCTTCTGCATCGATAGAATCTCTAATCAAGGTCCCGCAGCCATCTCTACTGCCATTCTATAAGCCTATTGATTATGTGGAAGTTTTGGCTCAAATCCATGAAGAACTTGAGTCATGTCCTCCACAGGAGCGGTCAAGTCTGTTTTTGTTTCAATACCAGGTCTTTAGGGGACTTGGGGAAGTTAAACTGATGCGTAGAAGCCTCCGGGGAGCTTGGCAGAGAGCTGACACCATTCATGAGAAGATTATATTTGGGGCATGGTTGAAGTATGAGAAGCAGGGGGAAAAGCTGATAGCCGACTTGCTAAGCACTTGTGGCAAATGTGCAAAGGAGTTTGGGCCCGCAGATGTTGCATCTCATTTTCCTTTTGACACAAATGTGAGTTCCCGGGAGAGAATTTTGACCAACGACAATGACGTATTGCAGTATGTTATATTTATGATTGGAAATGAGAAAATAGTTTGTGATAGACAAAAGATTTGTGAACTTTCACCACCATTCCATGCAATGCTAAAAGGGTATTTCAGTGAGTCACTTTCTGAGATTATAGATTTGACTGAAAACAATATATCTGCTTCAGGTATGAGGGCAATTAGTTATTTCAGTTTGGCTGGCTGTTTACCTGAGCTCCCTCCAAATCTTTTGTTGGAGATGTTAACTTTTGCAAACAAGTATTGTTGTGAAAGACTCAAAGATGCTTGTGATAGAAGACTTGCATCCTTAGTTTCCTCCAAAGAAGATGCCATGGAGCTCATGGAATATGCTTGTGATGAGAACTCAGTTGTCCTTGCTGCATCTTGTTTACAAATCCTTTTACGTGATCTTCCAAACTGTTTGAATGACAATCAGGTGGTGGAGATATTTACTCGTGCTAATAGGCAGCAGCTTGAAGTCATGGTTGGGCCAGGTTTATTTTTACTATTCTGTTTCTTAAGTGAAGTTTCTATCAACCTTAATCCTAGTTCAGACACAACAGCTCATTTCCTGGAAAGGTTAGTTGATTTTGCTGAAAATGACAATCAGAGATTGCTGGCTTTTCATCAATTGGGATGTGTAAGACTCTTAAGGAAAGAATATGATGAAGCACGGCATCTATTTGAGAGGGCTATAAATCTAGGCCATATTTATTCCATTGCAGGTTTAGCTAGACTGGACTTTATAAAGGGTCAGAAGCTTTTATCCTATGAGAGGCTCAGCTCAGTCATTTCCTCAGTTACTCCACTTGGATGGATGTACCAGGAAAGATCACTATATTGTGATGGAGATATAAGGTGGGAGGACCTTGAGAAAGCAAGTATTCTGGACCCTACTCTAATATATCCATACATGTATAGGGCTGCTTCTTTAATGAGGACACAGAATGCTCAAGCTGCACTGGCAGAAATCAATCGGATTCTTGGGTTCAAACTTTCATTAGAATGCTTAGAACTACGTTTCTTTATCCATCTAACTCTTGAGGACTACAAAGCAGCTCTTTGTGATATTCAAACAATTCTTACTCTGCGTCCAGATTATAGAATGTTTGAGGGGCGTGTAGCTGCATCCCAACTCTGTACTCTAGTACGTGAGCATGTTGAACATTGGACAACAGCAGATTGTTGGGCACGGTTATATGATTGTTGGTCTGCAGTTGATGATATTGGATCTCTATCTGTTATCTATCGGATGCTTGAGACTGATGCAGCAAAAGGTGTTTTATACTTCAGACAGTCGTTGCTTCTCCTGAGGCTGAACTGTCCCGAGGCAGCCATGCGGAGTTTGCAATTAGCTCAGCAACATGCATCAAGTGAGCATGAAAAACTTGTATATGAAGGGTGGATATTGTATGATACAGGCCATTATGAGGAAGGACTCCAGAAAGCTGAAGAGTCTATTAGTATCAAAAGGTCTTTTGAGGCCTTCTTCTTGAAGGCCTATGCGTTGGCAGACTCTAATCTTGATTCATCATGTTCTGCAACTGTTATCTCGCTCCTGGAAGATGCTTTGAAGTGCCCTTCAGATAATTTGCGCAAAGGTCAGGCACTGAACAATCTTGGAAGTGTTTTTGTTGACTGTGAGAAATATGACTTGGCAGCTGATTGCTATATCAATGCCCTTAAAATTCGACATACACGAGCCCATCAGGGTCTTGCCCGTGTTCATCATCTCAAACAAGATAGGGCTGCTGCCTATAAAGAGATGACTGAACTCATTCAGAAGGCAAAAAACAATGCATCTGCCTATGAGAAGAGGTCTGAATACTGTGATCGTGAACTTGCAAAGGCAGATCTGGAGATGGTGACTAGATTAGATCCACTTCGGGTGTATCCTTATAGATATCGAGCTGCTGTATTAATGGACAGCCGCATGGAAGATGAGGCCATTGCTGAACTCTCTAGAGCTATTGCATTTAAGGCTGATCTGCACCTCTTGCATCTGCGTGCAGCATTCCATGAGCACAAAGGGGATGTCTTGGGTGCACTAAGGGACTGTCGTGCTGCACTCTCTGTGGACCCAAACCACCAAGAGATGTTGGAACTACACAGTCGGGTTAATAGCCACGAGCCATGA 2664 0.4234 MRTFFTADSCKEPHPNALNPQSWFQIERGKLPKLSSKSSSASIESLIKVPQPSLLPFYKPIDYVEVLAQIHEELESCPPQERSSLFLFQYQVFRGLGEVKLMRRSLRGAWQRADTIHEKIIFGAWLKYEKQGEKLIADLLSTCGKCAKEFGPADVASHFPFDTNVSSRERILTNDNDVLQYVIFMIGNEKIVCDRQKICELSPPFHAMLKGYFSESLSEIIDLTENNISASGMRAISYFSLAGCLPELPPNLLLEMLTFANKYCCERLKDACDRRLASLVSSKEDAMELMEYACDENSVVLAASCLQILLRDLPNCLNDNQVVEIFTRANRQQLEVMVGPGLFLLFCFLSEVSINLNPSSDTTAHFLERLVDFAENDNQRLLAFHQLGCVRLLRKEYDEARHLFERAINLGHIYSIAGLARLDFIKGQKLLSYERLSSVISSVTPLGWMYQERSLYCDGDIRWEDLEKASILDPTLIYPYMYRAASLMRTQNAQAALAEINRILGFKLSLECLELRFFIHLTLEDYKAALCDIQTILTLRPDYRMFEGRVAASQLCTLVREHVEHWTTADCWARLYDCWSAVDDIGSLSVIYRMLETDAAKGVLYFRQSLLLLRLNCPEAAMRSLQLAQQHASSEHEKLVYEGWILYDTGHYEEGLQKAEESISIKRSFEAFFLKAYALADSNLDSSCSATVISLLEDALKCPSDNLRKGQALNNLGSVFVDCEKYDLAADCYINALKIRHTRAHQGLARVHHLKQDRAAAYKEMTELIQKAKNNASAYEKRSEYCDRELAKADLEMVTRLDPLRVYPYRYRAAVLMDSRMEDEAIAELSRAIAFKADLHLLHLRAAFHEHKGDVLGALRDCRAALSVDPNHQEMLELHSRVNSHEP* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2451 887 Gene3D Potassium Channel Kv1.1; Chain A 174 320 IPR011333 -
Dod01g2451 887 PANTHER ETO1-RELATED 1 887 IPR044631 GO:0010105
Dod01g2451 887 SMART tpr_5 710 743 IPR019734 GO:0005515
Dod01g2451 887 SMART tpr_5 636 669 IPR019734 GO:0005515
Dod01g2451 887 SMART tpr_5 602 635 IPR019734 GO:0005515
Dod01g2451 887 SMART tpr_5 381 414 IPR019734 GO:0005515
Dod01g2451 887 SMART tpr_5 510 543 IPR019734 GO:0005515
Dod01g2451 887 SMART tpr_5 839 872 IPR019734 GO:0005515
Dod01g2451 887 Gene3D Tetratricopeptide repeat domain 599 772 IPR011990 GO:0005515
Dod01g2451 887 SUPERFAMILY TPR-like 377 504 IPR011990 GO:0005515
Dod01g2451 887 SUPERFAMILY POZ domain 179 277 IPR011333 -
Dod01g2451 887 PANTHER ETO1-LIKE PROTEIN 1 1 887 - -
Dod01g2451 887 SUPERFAMILY TPR-like 474 739 IPR011990 GO:0005515
Dod01g2451 887 Gene3D Tetratricopeptide repeat domain 784 886 IPR011990 GO:0005515
Dod01g2451 887 Gene3D Tetratricopeptide repeat domain 359 547 IPR011990 GO:0005515
Dod01g2451 887 Coils Coil 762 782 - -
Dod01g2451 887 SUPERFAMILY TPR-like 693 878 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2451 Dod-Chr1 63443233 63449751 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2451 - - gmx:100793740 1505.35