Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2444 ATGGCGGCTCTGTCCCATGCTGATTCTAAGAGAATGTATTCATGGTGGTGGGACAGTCACATAAGCCCCAAAAACTCTAAATGGCTCCAAGAAAATCTGACAGATATGGATGCCAAGGTGAAGCAAATGATTAAGCTTATTGAAGAAGATGCAGATTCCTTTGCTAGGAGGGCAGAAATGTATTATAAGAAACGGCCAGAGCTTATGAAATTGGTTGAAGAGTTTTACCGGGCATACCGAGCATTGGCTGAGAGATATGATCATGCAACTGGAGTAATACGCCAAGCCCATCATACCATGGCTGAAGCATTTCCTAATCAAGTCCCTCTGGTGCTGACAGATGATTCACCTTTAGTTTCTTCCACAGAAACCGAGCCGCACATGCCAGTGACACCTCGCTGTGCACATTCATTTCTTGACCCAGATGAATCACAGAAGGATGCTTCTACTCATTTCCATGCTGTCAAAAGAAATGGAGCTTATCCTGATGATCCTGATTCTGCTCTAAGCAAAAAAGGTTTAAAACAGCTCAATGATCTCTTCCTATTGGGAGAACATGCAAGTCATGTGAAGCATTTAGAAGGGCGTGCTAGAAGGGGGCTCAGTTTTCTTGACACGGAGGAGACTATTGGGTTAAACAATGGAAGCCATGATGACTGGTCTCAAGTCTTATCTGAGTCTGAACGGATGACTAGAGCTGAGACAGAAATTTTGGCCTTAAAGAAAGCCCTTGCTAAATTAGAAAGTGAAAAGGAAGCTGGCTTGCTTCAGTATCATCACAGTTTGGAGAGATTGTCTAATCTGGAATCAGAAGTGTCTAGTGCCACGGAGAATTCTCAAGGACTAGATGAACGAGCAAGCAAAGCTGAAGCTGAAGTCCAATCCTTGAAGGAGGCGCTTGCTGAATTGCAGGCTGAAAGAGAAGCTCGTCTTTCTCAGTACCAGCAGTGCTTGGAGAAAATGTTTAATCTGGAGGAAAGCATCTCCTCTGCTCATAAGGATGTAAGAGAACTTAATGAACGAGCTATTAGAGCTGAAACTGAAACTGAATCCTTAAAGCAGGACCTTGCTAGACTAGAAGCTGAAAAGGGAGCTGCCCTTGTTCGATATAACCAGTCCTTGGAGACATTGTCAAACTTGGAGGAGAAATTAGCTCAAGCAGAGGAGAATGCAAGGAGAATAAATGAGCAGGCTAATACAGCTAGAAGTGAAATTGAGGCCATGAAGTTAGAGATTGCTAAACTTACTGAAGAGAAGGAAGATGCTGCTCTTCGTTATCAGCAATGCTTGGAGATAATTTCTAGTTTGGAGCATAAACTCTCTTGTGCTGAAGAGGAGGTGCATAAGCTAAAATGCAAGATAGATGATGAGGTTGAAAAGTTACAAAGTTCTGAACAGAAATGTCTTCTCCTGGAAACGACAAATCAGTCTCTGCAATCTGATTTGCAGTCTTTAGCACAGAAGATGGGTTCCCAAGGTGAAGAACTTAGCAAGAAGCAGAAGGAATTGAGTAGACTTTGGACTTGCATACAAGAGGAGCGGCTGCAATTTATTGAGGCTGAAACTGCATTCCAAACTCTTCAGAATCTGCATTCTAAGTCTCAGGAAGAGCTTAGATCTCTTGCAGCTGACGTTCATAACAAGGCAGAAATTCTAGAGAACTTGGAATTCCGAAAGCAGGCTTTAGAGGATGAAGTTCACAGGGTCAAGGAGGAAAACCAAATTCTAAATGAACTCAAATTGTCTTCATCTCTGTCTACAAAAAATTTGCAGGATGAGATGTTGAACCTGAGGGAGAAGATAAAGCAACTTGAACAAGAGGTCGGACTGCGGGTGGATGAAAGGAATGCTCTTCAACAGGAAATTTATTGTCTAAAAGAGGAGCTCAATGATTTGAATAAAAGACATCAATCCATGATGGAGGAGGTCGGGTCAACTGGCTTAGACCCACAGCACTTTGCCTCATCTGTGAAGATACTGCAAGATGAGAACTCAAAGCTGAAGGAGACATGTGAGGCTAACCAAGGTGAGAAAGCATCTCTTCTGGAAAAACTGGAAATTATGGAGAAGCTTTTGGAGAAAAATGCTGTTTTGGAGATTTCCCTTTCAAATTTGAATGCTGAGCTGGAGACTGTCAGAGGAAAGGTGAAGGTATTGGAAGAAACTTGCCAATCTTTGCTTGGGGGTAATTCCACTCTTGCAGCTGAGAAGACCACCTTGTTTTCTCACTTACAAACTACAGCTGAAAAGCTGGAGAAGCTCTCAGAAAAGAACAACCTTTTAGAAAATTCACTGCTTGACGTGAATGCTGAGTTGGAAGGATTAAGGGTGAAGTCAAAGATCTTAGAGGACTCTTGCCGGTCACTTGACCATGAGAAGTCCAGTCTCACCTCCGAGAAAGAAACCTTAGTTTCAGAGTTGAACATCACTCGTCAAACACTGGAAGATCTCGAGAAACAACGCAGTGAATTGGAACTAAAGCATCTGGATCTAAAAGCAGAAAGAGAGTCTGCACTTCAAAAGGTGGAAGAGCTGCTAGTTTCATTGTATGCTGAGAGAGAAGAGCATTCCAGACTTGTGCAATTGAATGAAGGTCACTTGGCTGAGAAGGAACAACAAATTCATGCTCTAGAAGAAGATGCAAGTCACTGGAAAATGGAATATGACAAGGAACTAGACAGAGCTGTACATGCTCAAATGGAAATTTTCATCTTGCAGAGATGTATCATTGATCTGGAGCAAAAGAACTTCTCCCTTCTAGTTGAGTGTCAGAGACTCTTGGAGGCATCCAAACTGTCTGATAGATTGATATCTAAATTGGAGAATGACAATGTTCAAAAGCAGGTTGATGTGAATTCTATGTCTGAGAAAATTAAAATACTAAGGATTGGGCTGCTTCAGGTGTTAAAGACTCCTGACATTAACAGTGAGCACTGTTGTGAAGATATGACTGGAGAAGATCAGGAGCTTCTGAACCAAATACATGGCAAACTTCAGGAGTCACATAACTCTTTTGTCACAGTTTCCAATGAAAAACAGAAAATGGCCATTGAGAATTCAGTTCTTGTTACATTCCTTGGGCAATTGAAATCAAAGGCAGAAAATCTTGTGACACAAAGAGATTCCCTTGATGAGGAGTTGAGGACTCAGTCTAAGCAGTTCTTAGCACTGCAAGCAGATGTCCAAATGATACTGGACAAGAATCAGGAACTGAAGTTGACAATAAGCAAGGGAGAAGAGAAAATGCAAGTAATGACAACTGAAATAGAGAATCTATGCAAACAGCTGTCAGACTTAGATGAGGCTAACAAAAACATACAGGAAGAAAGTTACAAAACAGTTGAAGAGAAAAATTCCTTGATGAGAAGATTTCTAGCTCTGGGTGAAGAGAAAAGTAACTTGGAAGAAGAAATACGTGAGATGATTCACAAGATAATAGCTCAATCTAATATTTCTCTGGTTTATCAGAACATTGTCTTTGAAAAACTCCTGGCACTGAAAGACCTGAGTGAAGATCTTGATAGACTTTGTTCGGTAAATACTGACCTCGAGGAGAGATTAAAAACTATGGCAGGCAAATTAGAAGACGTACAAATTGAAAATACACATCTTAAAGAGTCATTTGTGGTGTCAAATGTTGAACTAGAACTTGTTGACTCTGTCAATGATCAATTAAATTGTCAGATTAGGATTGGAATGGAATTGTTGTCCCAGAAGGAAAATGAGATTTTGAAAGCGGCAGAGATGTTTAATGTTTTACATGATGAGAAAACAGAATTGCAAAGAATGGTAGAAGATCTGAAGATTAAGTACGATGAGGCCAGGCTTATACTTGAAGACCAAGCTGGCCAAATTTTAAAATTATCGTCAGACAAGGATTGGCAAAATGAAGAGCTCGGATGCCTTTGTGAAGTGAATCAGAAGTTGGAGGCTGAAATGAGGCACCTGCGCCAAGAACTTGGAGAAACTAAACTGAGGGAGGAGGAGCTCAGTTATGAACTACAAAAGGGAACAAAAGAGATTGAACGATGGGAAACTCAGGTTGCCACCCTCTTTGCTGGACTACAGATTTCTGCTGTCAATGAGACATTACTTGAAGGGAAGGTCCATGAGCTAGCTGAAGCATGTGAGAATCTTGAACGCAGAAGCAACTCTAACGGCATGGAAAGTGAGAAGCTGAAAGAAAGAGTTGATGAGTTGGAAGGTGAAAATGGAAGACTACGCCATCAGTTGGCTGCTTATGTCCCAGCTGTCAGTGCTTTGAATGATTGTATAACATCCCTGGAGATGCACACTCTTTTACATGCAAAACCTCATGACTACAAAGAATCAAAGGTTAAGAATCTGGCAAATCACCCGTATACTGAAAGTGGTCCACAAAGAGGTGAATATCAGGATGCTACAGCACCACCAGATGCACTTCCAGATTTCCAAGACATGCAGAAAAGGATCAATGCAATTGAAATGGCTGTGAAACAGATTAATGAATCTTTCAATCCTAAGGACGAAATGAGAGAGATTCAAGTGTTAAAACCCGGAATCAGCTGGCGCCAAAGAAATATTCAATCAACTAAGCATGTTACTCAAACGGATGAAGCAAAGGAGCATCAACAGAAGCCAAGAAAGTCAATGCAAGATATCCCTGTAGCAGAGATTGAAGTTCTTCCAAAAGACATCATGCTTGATCAAATGACTGAAAGTTCATCATATGGGATAACTAGGAGAGAAACTCTTGAGTCCGATGATCAAATGCTCGAGTTGTGGGAAACTGCCAATAAGGATGGCACCATTGGCTTGAAAGTTGGCAACTCATCACAGAGGATAGCCACTGCACCTGCTGGTTACCATCAAAGGGGACCAACCAAGACACCCAAAAACAAGTATCCTTTAGTACAGTCCTTGGCTGAAAAGGAGTTGAGTGTGGACAAATTGGAGATTCCAAGAAGTCTGACACAGCCACATGAAGAAGGCAACAGGAAGAAAATTTTAGAAAGACTTGATTCTGATGCTCAAAAGTTGACCAATCTTGAAATTACTGTACAAGATTTGATAAACAGGATAGAAATTACTGAGAAGAGCTCAAGGGGAAAAGATGCTGAGCATGATTCTGTGAGAGGGCAGCTAGAAGCTGCTCAAGAGGCCATCACAAAGTTATTTGATACTAACCGCAAGTTGGTAAAGAATGTAGAAGAGGGTGCCTTGTCCTCCGTTGGGAGGTCCTCAACAGATTCAGATGAGAGTGGAAGTGTCAGAAGGAGAGTTTCAGGACAGGCTCGGAGAGCATCAGAAAAAATAGGACGGCTGCAGTTGGAGGTGCAAAGACTGCAATTTCTGCTTCTGAAGTTGAATGAAAGAAAAGAAGACAAGGGGAAAACAACGATTGATGATCGAAATTCAAGAGTTCTTTTGTGTGATTATCTCGATGGTGGGACAAGAATCAAGTACCAGATGAAGAAGAAGAAGAAAGCACCCTTTTGTGCATGCATTCAACCTCCCACTAAGGGGGATTGA 5511 0.4152 MAALSHADSKRMYSWWWDSHISPKNSKWLQENLTDMDAKVKQMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRQAHHTMAEAFPNQVPLVLTDDSPLVSSTETEPHMPVTPRCAHSFLDPDESQKDASTHFHAVKRNGAYPDDPDSALSKKGLKQLNDLFLLGEHASHVKHLEGRARRGLSFLDTEETIGLNNGSHDDWSQVLSESERMTRAETEILALKKALAKLESEKEAGLLQYHHSLERLSNLESEVSSATENSQGLDERASKAEAEVQSLKEALAELQAEREARLSQYQQCLEKMFNLEESISSAHKDVRELNERAIRAETETESLKQDLARLEAEKGAALVRYNQSLETLSNLEEKLAQAEENARRINEQANTARSEIEAMKLEIAKLTEEKEDAALRYQQCLEIISSLEHKLSCAEEEVHKLKCKIDDEVEKLQSSEQKCLLLETTNQSLQSDLQSLAQKMGSQGEELSKKQKELSRLWTCIQEERLQFIEAETAFQTLQNLHSKSQEELRSLAADVHNKAEILENLEFRKQALEDEVHRVKEENQILNELKLSSSLSTKNLQDEMLNLREKIKQLEQEVGLRVDERNALQQEIYCLKEELNDLNKRHQSMMEEVGSTGLDPQHFASSVKILQDENSKLKETCEANQGEKASLLEKLEIMEKLLEKNAVLEISLSNLNAELETVRGKVKVLEETCQSLLGGNSTLAAEKTTLFSHLQTTAEKLEKLSEKNNLLENSLLDVNAELEGLRVKSKILEDSCRSLDHEKSSLTSEKETLVSELNITRQTLEDLEKQRSELELKHLDLKAERESALQKVEELLVSLYAEREEHSRLVQLNEGHLAEKEQQIHALEEDASHWKMEYDKELDRAVHAQMEIFILQRCIIDLEQKNFSLLVECQRLLEASKLSDRLISKLENDNVQKQVDVNSMSEKIKILRIGLLQVLKTPDINSEHCCEDMTGEDQELLNQIHGKLQESHNSFVTVSNEKQKMAIENSVLVTFLGQLKSKAENLVTQRDSLDEELRTQSKQFLALQADVQMILDKNQELKLTISKGEEKMQVMTTEIENLCKQLSDLDEANKNIQEESYKTVEEKNSLMRRFLALGEEKSNLEEEIREMIHKIIAQSNISLVYQNIVFEKLLALKDLSEDLDRLCSVNTDLEERLKTMAGKLEDVQIENTHLKESFVVSNVELELVDSVNDQLNCQIRIGMELLSQKENEILKAAEMFNVLHDEKTELQRMVEDLKIKYDEARLILEDQAGQILKLSSDKDWQNEELGCLCEVNQKLEAEMRHLRQELGETKLREEELSYELQKGTKEIERWETQVATLFAGLQISAVNETLLEGKVHELAEACENLERRSNSNGMESEKLKERVDELEGENGRLRHQLAAYVPAVSALNDCITSLEMHTLLHAKPHDYKESKVKNLANHPYTESGPQRGEYQDATAPPDALPDFQDMQKRINAIEMAVKQINESFNPKDEMREIQVLKPGISWRQRNIQSTKHVTQTDEAKEHQQKPRKSMQDIPVAEIEVLPKDIMLDQMTESSSYGITRRETLESDDQMLELWETANKDGTIGLKVGNSSQRIATAPAGYHQRGPTKTPKNKYPLVQSLAEKELSVDKLEIPRSLTQPHEEGNRKKILERLDSDAQKLTNLEITVQDLINRIEITEKSSRGKDAEHDSVRGQLEAAQEAITKLFDTNRKLVKNVEEGALSSVGRSSTDSDESGSVRRRVSGQARRASEKIGRLQLEVQRLQFLLLKLNERKEDKGKTTIDDRNSRVLLCDYLDGGTRIKYQMKKKKKAPFCACIQPPTKGD* 1837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2444 1836 Coils Coil 1082 1109 - -
Dod01g2444 1836 SUPERFAMILY Tropomyosin 406 646 - -
Dod01g2444 1836 Coils Coil 1477 1497 - -
Dod01g2444 1836 Coils Coil 1026 1053 - -
Dod01g2444 1836 Coils Coil 321 362 - -
Dod01g2444 1836 Coils Coil 657 677 - -
Dod01g2444 1836 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Dod01g2444 1836 MobiDBLite consensus disorder prediction 1528 1542 - -
Dod01g2444 1836 Coils Coil 1708 1728 - -
Dod01g2444 1836 Coils Coil 800 887 - -
Dod01g2444 1836 Coils Coil 1117 1137 - -
Dod01g2444 1836 Coils Coil 370 467 - -
Dod01g2444 1836 Coils Coil 1250 1277 - -
Dod01g2444 1836 Coils Coil 688 722 - -
Dod01g2444 1836 Coils Coil 1673 1693 - -
Dod01g2444 1836 Gene3D - 227 397 - -
Dod01g2444 1836 Coils Coil 744 778 - -
Dod01g2444 1836 Coils Coil 1166 1200 - -
Dod01g2444 1836 Coils Coil 1390 1410 - -
Dod01g2444 1836 MobiDBLite consensus disorder prediction 1734 1758 - -
Dod01g2444 1836 Coils Coil 230 250 - -
Dod01g2444 1836 Coils Coil 1299 1326 - -
Dod01g2444 1836 MobiDBLite consensus disorder prediction 1522 1544 - -
Dod01g2444 1836 Coils Coil 1362 1382 - -
Dod01g2444 1836 Coils Coil 587 642 - -
Dod01g2444 1836 PANTHER PROTEIN NETWORKED 4A 1 1836 - -
Dod01g2444 1836 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1 1836 - -
Dod01g2444 1836 Coils Coil 265 313 - -
Dod01g2444 1836 Coils Coil 937 957 - -
Dod01g2444 1836 Coils Coil 545 579 - -
Dod01g2444 1836 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2444 Dod-Chr1 63355725 63363817 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2444 - - gmx:100810726 2603.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2444 01 63355725 63363817 Dod01g2444 01 63355725 63363817 ECH
Dod01g2444 01 63355725 63363817 Dod07g0579 07 7627256 7627603 PCT