Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2442 ATGTCGTCGTCGCTGATAAGAGATTTTCTCCGCCGGGCGGGGGGCGCAGCCGTCGTGGATGGTGGTCTCGCGACGGAGCTGGAGCGGCACGGCGCCGACCTGAACGATCCCCTTTGGAGCGCCAAATGCCTCCTTTCCTCTCCTCACCTCATTCGCCAGGTGCATCTTGATTACCTGGAAAATGGTGCAGATATTATAATCACTGCGTCTTATCAGGCCACCATTCAGGGCTTTAAAGCAAGAGGCCTGTCCGATAAAGAAAGTGAAGGCTTGCTCAGAAAAAGTGTTGAAATTGCTCGTGAGGCAAGAGATGTGTATTATGAGAAATGTGCTGCTAGCTCTTCCGGTGATGGTGCTGATAGTAGAATCTTCAAAAACCGCCCGATACTGGTTGCAGCATCGGTGGGGAGCTATGGAGCTTATTTGGCTGATGGATCAGAGTACAGTGGGGACTATGGTGATGCTGTCACGTTAAAAACTCTTAAAGATTTTCATCGGAGAAGAGTTCAAATTTTAGCAGATTCTGGTGCTGATCTCCTTGCATTTGAAACAGTGCCAAATAAGCTAGAAGCTCAGGCTTATGTGGAGCTTCTAGAAGAAGAAGACATAAAGATTCCAGCATGGTTTGCTTTTAACTCTAAGGATGGAATCAATGTTGTTAGTGGTGATTCTTTAAAGGAATGCAGCTCCATTGCTGAATCATGCAACAAAGTTGTTGCTGTTGGAATCAATTGTACCCCACCTAGATTCATACATGATCTGATAATATTGGTTAAGAAGGTGACTACAAAACCAATTGTTGTATATCCAAATAGCGGGGAAACTTATGATGCTAACTTGAATCAGTGGGTGCAAAATACAGGTGTTACAGATGAAAATTTTGTGTCATATGTAAACAATTGGCGTGAGTCAGGGGCTTCCCTTGTGGGTGGCTGTTGCAGAACAACCCCAGCTACTATTAGAGGAATATACAGGGTACTCTCCAGCAGTCGATCAGCCACAAAATGA 1008 0.4534 MSSSLIRDFLRRAGGAAVVDGGLATELERHGADLNDPLWSAKCLLSSPHLIRQVHLDYLENGADIIITASYQATIQGFKARGLSDKESEGLLRKSVEIAREARDVYYEKCAASSSGDGADSRIFKNRPILVAASVGSYGAYLADGSEYSGDYGDAVTLKTLKDFHRRRVQILADSGADLLAFETVPNKLEAQAYVELLEEEDIKIPAWFAFNSKDGINVVSGDSLKECSSIAESCNKVVAVGINCTPPRFIHDLIILVKKVTTKPIVVYPNSGETYDANLNQWVQNTGVTDENFVSYVNNWRESGASLVGGCCRTTPATIRGIYRVLSSSRSATK* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2442 335 PANTHER ZGC:172121 2 333 - -
Dod01g2442 335 PIRSF BHMT 6 207 IPR017226 GO:0008168|GO:0008270|GO:0009086
Dod01g2442 335 PIRSF BHMT 276 334 IPR017226 GO:0008168|GO:0008270|GO:0009086
Dod01g2442 335 ProSiteProfiles Homocysteine-binding domain profile. 5 327 IPR003726 -
Dod01g2442 335 Gene3D - 7 325 IPR036589 -
Dod01g2442 335 PANTHER HOMOCYSTEINE S-METHYLTRANSFERASE 2 2 333 - -
Dod01g2442 335 SUPERFAMILY Homocysteine S-methyltransferase 13 329 IPR036589 -
Dod01g2442 335 Pfam Homocysteine S-methyltransferase 18 325 IPR003726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2442 Dod-Chr1 63334004 63340539 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2442 K00547 - gmx:100790567 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2442 01 63334004 63340539 Dod01g2442 01 63334004 63340539 ECH