Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2437 ATGGCACCAAGAAGGATGATTGAGATACTGCTGAGTATGTCCCTTGTAATGAGTTTTTGGGGAGCCACAGTAGTGGCTCAATATTCTCAATCAAGTTGCACCAATGTGCTCCTGAGCCTTTCTCCATGCCTTGACTACATAACAGAAAAGGCCACAACCCCATCTTCTGAGTGCTGCTCCCAACTTGCCTATGTAGTGGGGTCACAGCCACAGTGCCTATGTGAGGTTGTTAATGGTGGTGCCTCATCTATTGGTGCCAGCCTCAACATCAATCAGACTCGGGCTTTGGCACTCCCCAGTGCCTGCAGAGTGCAAACTCCTCCAATTAGCATCTGCAGTGGCTCAGTTTCTCCTCCGACTGGTGTTCCTGTTTCCAACATTCCAAATTCCCCCTCAGGGATTGGATCGAATACTGTTTCATCAACGAGCGGAGGAAGTGGCGGGAGCTCATTTCATTGGAATTCAAGTTCGACTAAATTAACCCCTCCTTTGGTTGTCATGTTTCTCTTTGCAGCGACTTTGACTCTCAACTTCATAACTACATCCTAG 549 0.4791 MAPRRMIEILLSMSLVMSFWGATVVAQYSQSSCTNVLLSLSPCLDYITEKATTPSSECCSQLAYVVGSQPQCLCEVVNGGASSIGASLNINQTRALALPSACRVQTPPISICSGSVSPPTGVPVSNIPNSPSGIGSNTVSSTSGGSGGSSFHWNSSSTKLTPPLVVMFLFAATLTLNFITTS* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2437 182 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 32 114 IPR036312 -
Dod01g2437 182 Pfam Probable lipid transfer 17 112 IPR016140 -
Dod01g2437 182 SMART aai_6 33 112 IPR016140 -
Dod01g2437 182 MobiDBLite consensus disorder prediction 124 143 - -
Dod01g2437 182 Gene3D - 30 110 IPR036312 -
Dod01g2437 182 PANTHER LIPID TRANSFER PROTEIN 6 179 - -
Dod01g2437 182 CDD AAI_LTSS 40 104 - -
Dod01g2437 182 PRINTS Plant phospholipid transfer protein signature 32 48 IPR000528 GO:0006869|GO:0008289
Dod01g2437 182 PRINTS Plant phospholipid transfer protein signature 53 67 IPR000528 GO:0006869|GO:0008289
Dod01g2437 182 PRINTS Plant phospholipid transfer protein signature 89 106 IPR000528 GO:0006869|GO:0008289
Dod01g2437 182 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 6 179 IPR043325 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2437 Dod-Chr1 63283263 63285085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2437 1 178 Acyl Lipid Metabolism Gene Families AT4G14815 39.888 4.79e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2437 - - gmx:100789510 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2437 01 63283263 63285085 Dod01g2437 01 63283263 63285085 ECH
Dod07g0571 07 7537449 7538972 Dod01g2437 01 63283263 63285085 PCT