Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2436 ATGGCTGGACTTATTGAAGGACTTCCTGACGCCATTGCAATTAGATGCCTCGCACGGGTTCCCTTCTACCTCCACCCGAGGTTAGGGCTTGTCTGTCGTTCTTGGCAAGCAGCCATTCGTAGCCCTGAACTATTTAAAGCTCGGCAGGAGGTTGGTTCATCTGAGGAACTGTTATGTGTCTGTGCATTTGACCCAGAGAACATATGGCAGCTCTATGATCCATTACGAGATATGTGGATCACACTTCCAGTTCTTCCCTCAAAGATCAGGCACCTTTCCCACTTTGGTGCTGTCTCCACTGCTGGAAAGTTGTTTGTGATTGGTGGTGGAAGCGACGCTGTTGATCCGTTGACTGGTGACCAAGATGGTTGTTTTGCAACAGATGAAGTCTGGTCATACGACCCTGTAGACCGGCAGTGGGCCCCTCGGGCATCAATGCTTGTTCCTCGGTCTATGTTTGCATGTTGTGTTTTGAATGGGAGAATTGTTGTGGCTGGGGGCTTCACTAGCTGCCGAAAGTCAATATCTCAAGCAGAAATCTATGACCCTGAGAAGGATGTTTGGATTCCAATGCCTGATCTTCATCGAACTCATAATTCAGCCTGTACAGGAGTAGTGATCGGCGGAAAGGTGCATGTGCTGCACAAGGATATGTCAACAGTTCAAGTTTTAGACAATGCAGGACCTGGATGGATCGTTGAGGAATGCGGGTGGCTACAAGGTCCAATGGCAGTCGTTCAGGATGCACTTTATGTGATGAGCCATGGATTTATCTTCAAGCAGGATAAAGAAGGGAGGAAGGTTGTAAGTTCGGCATCAGAGTTTCGAAAGAGAATTGGGTGTGCTATGATAGGGCTTGGTGATGATCTATACATGATTGGAGGTGTCCTTGGCCCTGACAGATGGAACTGGGACATTAAGCCATTATCGGGTGTCGATGTTCTCACAACTGGGAGTGAGAGACCAACTTGGCGCCCGGCAGCTCCAATGACACGGTGTCGCGGTACTATTCTTGGTTCTACACTGCTGAGAATTTAG 1038 0.4855 MAGLIEGLPDAIAIRCLARVPFYLHPRLGLVCRSWQAAIRSPELFKARQEVGSSEELLCVCAFDPENIWQLYDPLRDMWITLPVLPSKIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGDQDGCFATDEVWSYDPVDRQWAPRASMLVPRSMFACCVLNGRIVVAGGFTSCRKSISQAEIYDPEKDVWIPMPDLHRTHNSACTGVVIGGKVHVLHKDMSTVQVLDNAGPGWIVEECGWLQGPMAVVQDALYVMSHGFIFKQDKEGRKVVSSASEFRKRIGCAMIGLGDDLYMIGGVLGPDRWNWDIKPLSGVDVLTTGSERPTWRPAAPMTRCRGTILGSTLLRI* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2436 345 Gene3D - 59 342 IPR015915 GO:0005515
Dod01g2436 345 SUPERFAMILY Kelch motif 61 331 IPR015915 GO:0005515
Dod01g2436 345 Pfam Kelch motif 92 146 IPR006652 GO:0005515
Dod01g2436 345 Pfam Kelch motif 149 194 IPR006652 GO:0005515
Dod01g2436 345 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 2 345 - -
Dod01g2436 345 Pfam F-box domain 7 45 IPR001810 GO:0005515
Dod01g2436 345 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP30 2 345 - -
Dod01g2436 345 SUPERFAMILY F-box domain 4 47 IPR036047 GO:0005515
Dod01g2436 345 SMART kelc_smart 161 208 IPR006652 GO:0005515
Dod01g2436 345 SMART kelc_smart 103 160 IPR006652 GO:0005515
Dod01g2436 345 SMART fbox_2 8 48 IPR001810 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2436 8 188 Miscellaneous Gene Families AT4G33900 28.947 3.47e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2436 - - gmx:100800954 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2436 01 63268535 63272502 Dod01g2436 01 63268535 63272502 ECH