Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2428 ATGGATACCCTCCTCCTCCAGATTCCTTCTTCGTCCTCCTCCTCCTCCTCTTCCTCCTCCAGTTCCATGGCGAAGCGACCCTGCCCGTCGCAGAACCCCCCTAGGCCACACACCCTCAGCCACGTGGACCACATCCTCGAGGCCTTCCTCTCCCTCTCGGAGCTCCCTTCCCTCGAACTCTCCTTCGAGCGCCTCCTCCACTCCGATTCCGACCTCATCGATCGCGCCCTCAGGATAGGATCCATGCTCCTCCACGCAGCCAATCACTCCTCCAGAAAACGCGCTTCCTCTCACAACTCCCTCGCCTGGCCTCTTCCCCCTGACCTCACCATCAAGGTCTTCTCAATGCTCGATACTCAGAGCCTGTGCTATGCATCAGCTACTTGTTCGTTGTTTAGCAAATGTGCTAAAGATCCCCTCTGCTATGCAAATCTCAATTTGATGACACTTGTTCCGAAGGTTAACAATGCAGTCGTTGCCACGATGATTCAGCGAGCTAGAAAGGCACTTAGGTCGCTCAAGCTTGGTGTTGTCCCTAGTGTTCCTTCTCCTGAATCATGTCAACCAGTGGTTTATACTATCAAAAACACTATTGTAGAGGTATCTAACTTTTCATGGAATGATAAGAGATCCCGGCAAGGGAGAGAGTCATCCATTCTTACAAGATGCTGTTTAAGCCCTTTAAGTGCAGATAGTGGTGCTCCAGGGGCACTTTTGAGAAAGTTACACTTGTATAATATTGAAAGAATGGATAATGCGTCACTTGGCAGGGCATTGTCAGCATGCCCTTCTATCCTTGATCTGGAAATTGTTGGGCTACATGTTGAACTGAGGCAAACATTAATGTCGGTAAGTGCAAATTGCCACTTGATCGAGCGACTGTTTTTTGAATCTTCTAAAACAGGTAGAGATGACAGTCTGAAAACACAAACCTGTTGTAACCTAGTAATCAATTGCCCTCGTCTAACTTCTTTATCTCTTAGAGGCTTTAAGCTACATGATTATAAAGTCCGCTCACTGGTTAAGGGATTTCGGAAACTGAAATACGCTGACTTTTCAACATCCTATTCAATCACAGGAAGCTTCTTAAGAAACCTTGGAAATAACATTGGTGGGAATTTGCTCGAGTTCTTAATTTTGAGGGATTGCATGCATCTCAAAGAGACGGAAGTTGCTAGATTGTTGACAGCAATTATTGCAGGCGATTTCAAATTGCTTGTTCATCTTGACATATCCAATAGGGAAGGCTTAGCATCTGAGGCTGACTGGTATCATAGGTGCTACAACTCTAGTAATATGCCTATAAAGCAGGTTTTGGAAGCAAGGCCTGATATGTGTTTGATGGCTGAATATCCATCAGAAGGAAGTTACATTGAGACATTTGATACTGATATGAATAGTGAGATAAGTCTTCCATCACATTTGAGCAGCCACGGCCATGCATCAGATGGATCGATATTTGGTTCATCTGAAAGCAGCTATAACAGTGACCAGGGTAGTGGCAATGAGGATGGTCAAGATGCCAGCTTTGTGACTTTTGGGGAAAGTTCAGATGACATTGACTTGCTGGCCTTGTAG 1578 0.4575 MDTLLLQIPSSSSSSSSSSSSSMAKRPCPSQNPPRPHTLSHVDHILEAFLSLSELPSLELSFERLLHSDSDLIDRALRIGSMLLHAANHSSRKRASSHNSLAWPLPPDLTIKVFSMLDTQSLCYASATCSLFSKCAKDPLCYANLNLMTLVPKVNNAVVATMIQRARKALRSLKLGVVPSVPSPESCQPVVYTIKNTIVEVSNFSWNDKRSRQGRESSILTRCCLSPLSADSGAPGALLRKLHLYNIERMDNASLGRALSACPSILDLEIVGLHVELRQTLMSVSANCHLIERLFFESSKTGRDDSLKTQTCCNLVINCPRLTSLSLRGFKLHDYKVRSLVKGFRKLKYADFSTSYSITGSFLRNLGNNIGGNLLEFLILRDCMHLKETEVARLLTAIIAGDFKLLVHLDISNREGLASEADWYHRCYNSSNMPIKQVLEARPDMCLMAEYPSEGSYIETFDTDMNSEISLPSHLSSHGHASDGSIFGSSESSYNSDQGSGNEDGQDASFVTFGESSDDIDLLAL* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2428 525 Gene3D Ribonuclease Inhibitor 277 437 IPR032675 -
Dod01g2428 525 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 37 467 - -
Dod01g2428 525 PANTHER F-BOX SKIP17-LIKE PROTEIN 37 467 - -
Dod01g2428 525 MobiDBLite consensus disorder prediction 482 513 - -
Dod01g2428 525 Pfam F-box-like 105 147 IPR001810 GO:0005515
Dod01g2428 525 MobiDBLite consensus disorder prediction 1 37 - -
Dod01g2428 525 SUPERFAMILY F-box domain 93 147 IPR036047 GO:0005515
Dod01g2428 525 MobiDBLite consensus disorder prediction 482 518 - -
Dod01g2428 525 Gene3D - 87 172 - -
Dod01g2428 525 MobiDBLite consensus disorder prediction 1 28 - -
Dod01g2428 525 SUPERFAMILY RNI-like 222 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2428 Dod-Chr1 63165062 63170950 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2428 K10268 - gmx:100786317 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2428 01 63165062 63170950 Dod01g2428 01 63165062 63170950 ECH