Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2424 ATGTCTTCTCACTTCTCCACTCACTACCACCTTCCCTCTCTCTCTTCCTCTAACCATCTCCCTCTCTGTCCTCCTTCTCTCTCTCTTCACCACTTCTCCAAATCCTCTCTCGGTGCTGTGTCGTCCGAGGCCAAAGAAAAACAAGAGATAAGATGCAGAGCTATATCCAAGTCACGAACTCGAGAATATCCAGAAGTTTTGCGGGGTGGCATAGCAACGTTAAACTTGAGTGAGATTATTGTGGAGGATGACTTAGACGAGGAGCAAGATACCGAGGTTTGGGTGGCGAATGAGATCAAGAAAAGAGTGGAAGCTATCAAATCGATATTGGGTTCGATGGAGGACGGAGAGATAACCATATCTGCTTATGACACGGCATGGGTTGCTCTTGTTGATGTTCATGGAAGTGGTGGCCCCCAATTTCCATCGAGTGTAGAATGGATAGCAAAGAATCAGCTTCCTGATGGTTCATGGGGTGATAGTGAATTATTCTCAGCCCATGATCGGATCATTAACACGTTGGCTTGTGTCATTGCATTGAAGACATGGAAGACGCACCCTGAAAAGTGTGGAAAAGGAATGAAGTTTTTTAAAGAAAACCTAAGCAAGCTTCAGAATGAGAATGCTGAGCACATGCCAATTGGGTTTGAAGTTGCTTTCCCTTCACTTCTCGATATAGCTCGTGGTTTGAACATTGAAGTGCCACATGATTCCCCAATCTTGAACGACATCTATGCAAAGAGGGATGTAAAACTCACAAGAATACCAAGAGAGGTGATGCATAAAGTGCCCACAACTCTGCTACATAGCTTGGAGGGGATGTCAGGCCTGAACTGGAAAGAGCTTCTAAAACTTCAGTCTCAAGATGGGTCATTCTTGTTTTCTCCATCCTCCACTGCCTTTGCTCTCATGCAAACTAAAGATGAAAATTGTCTCAAATACTTGAATAAAGCGGTCAAGAAGTTCAATGGGGGAGTCCCAAATGTGTATCCTGTGGACTTGTTCGAACATATTTGGGTGGTAGATCGGTTGGACCGCCTCGGAATATCGCGATATTTTCAGCAAGAGATCAGAGACTGTGTGAGCTATGTTGTCAGATATTGGACTGAAAAGGGCATTTGCTGGGCAAGAAATTCAAGTGTTCAAGATATTGATGATACAGCAATGGGCTTCAGACTACTAAGGTTACATGGCTACCAAGTTTCAGCCAATGTGTTTAAGAACTTCGAGAGAAACGGTGAATTCTTTTGCTTTGCCGGGCAATCCACACAAGCGGTAACGGGAATGTTCAATCTGTATAGGGCCACACAAGTAATGTTCCCGGGGGAAGAGATCCTTGAACATGCCAAGCACTTCGCCGGCAAGTTTTTGCGGGAGAAGAGAGCAGCAAATGAGCTAATAGATAAATGGATCATAATGAAGAATTTGCCTGAAGAGGTGGCATATGCTTTGGACGTGCCATGGTATGCAAGCTTGCCTCGGGTGGAGACCAGATTCTACATTGATCAATATGGCGGTGAGAATGACGTGTGGATCGGCAAAACGCTTTATCGGATGCCATATGTTAATAACAAGAATTATCTCGAGCTTGCTAAATTAGATTACAACAATTGCCAAGCGGTGCATCTAACAGAATGGAGGAGAATTCAAAAGTGGTACTCAGAATCCAGATTGGCAGAATTTGGATTGAGCAGGAAATCTCTTCTATTGGCCTATTTTTTGGCAGCAGCCATCATATTTGAGCCTGAAAGGTCTCATGAGAGGCTTGCATGGGCCAAAACCATGGCATTGCTTGAGACAATGGCATCCTATGTTGCTGATGATGCTGAAATGAGGAAGGATTTCGTGAAAAAGTTCAGTGACTGCATCAACAAGCGTGACTACTCCATTGGCTGGAGGTTGAGCAGGAATGGAAGAACAGGAAACGCACTCGCTGAGACTTTGGTTGCAACCATAGATCAAATCTCGTGGGATCTACTTGTGTCTCATGGCCATGAAATTGGATATGATATGCATCACAGTTGGAAAAAATGGCTTTCAAGTTGGCAAATTGAAGGAGACAAGTGTCAAGGAAAAGCAGAGCTCTTAGTGCAGATAATAAACCTAAGCGGTGGCCATTGGATTTCAGACGAAATAAGGTTCAATCCACAGTACCAGCGACTACTTCAACTGACAAACAGAGTGTGTCACAGACTCCATTGTAACCAAAAGGACAAGGAACATGAGATTTGTAGCCACGGTAAGCACATTACCAACCCAGAAGCAGAGTCAGAGATGCGAGGACTTGTGCAGTTGGTGTTACAAAATTCTCCAGCTGGCGTTGATTTCAACATAAAGAATACTTTCCTGACAGTGGCCAAGAGTTTTTACTACGTAGCATTCTGTGATTCAAGGACCATCAACTTTCACATTGCTAAAGTGCTTTTTGAGAAAGTTGTATGA 2442 0.439 MSSHFSTHYHLPSLSSSNHLPLCPPSLSLHHFSKSSLGAVSSEAKEKQEIRCRAISKSRTREYPEVLRGGIATLNLSEIIVEDDLDEEQDTEVWVANEIKKRVEAIKSILGSMEDGEITISAYDTAWVALVDVHGSGGPQFPSSVEWIAKNQLPDGSWGDSELFSAHDRIINTLACVIALKTWKTHPEKCGKGMKFFKENLSKLQNENAEHMPIGFEVAFPSLLDIARGLNIEVPHDSPILNDIYAKRDVKLTRIPREVMHKVPTTLLHSLEGMSGLNWKELLKLQSQDGSFLFSPSSTAFALMQTKDENCLKYLNKAVKKFNGGVPNVYPVDLFEHIWVVDRLDRLGISRYFQQEIRDCVSYVVRYWTEKGICWARNSSVQDIDDTAMGFRLLRLHGYQVSANVFKNFERNGEFFCFAGQSTQAVTGMFNLYRATQVMFPGEEILEHAKHFAGKFLREKRAANELIDKWIIMKNLPEEVAYALDVPWYASLPRVETRFYIDQYGGENDVWIGKTLYRMPYVNNKNYLELAKLDYNNCQAVHLTEWRRIQKWYSESRLAEFGLSRKSLLLAYFLAAAIIFEPERSHERLAWAKTMALLETMASYVADDAEMRKDFVKKFSDCINKRDYSIGWRLSRNGRTGNALAETLVATIDQISWDLLVSHGHEIGYDMHHSWKKWLSSWQIEGDKCQGKAELLVQIINLSGGHWISDEIRFNPQYQRLLQLTNRVCHRLHCNQKDKEHEICSHGKHITNPEAESEMRGLVQLVLQNSPAGVDFNIKNTFLTVAKSFYYVAFCDSRTINFHIAKVLFEKVV* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2424 813 Gene3D - 105 536 IPR036965 GO:0010333|GO:0016829
Dod01g2424 813 Pfam Terpene synthase family, metal binding domain 528 687 IPR005630 GO:0000287|GO:0010333|GO:0016829
Dod01g2424 813 SUPERFAMILY Terpenoid synthases 523 792 IPR008949 -
Dod01g2424 813 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 120 199 IPR008930 -
Dod01g2424 813 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 289 509 IPR008930 -
Dod01g2424 813 SFLD Terpene Cyclase Like 1 N-term 95 518 - -
Dod01g2424 813 Gene3D Farnesyl Diphosphate Synthase 538 813 IPR008949 -
Dod01g2424 813 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 95 518 - -
Dod01g2424 813 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 86 810 - -
Dod01g2424 813 Gene3D - 122 333 - -
Dod01g2424 813 Pfam Terpene synthase, N-terminal domain 278 484 IPR001906 GO:0010333|GO:0016829
Dod01g2424 813 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 86 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2424 Dod-Chr1 63097159 63108580 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2424 K04120 - gmx:100784193 1318.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2424 01 63097159 63108580 Dod01g2424 01 63097159 63108580 ECH