Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2421 ATGACATCGCAGTTGTCCTTCAATCCCATTCATGCGAGCCCCACGGAAAGTGTGACGTACTGCAAATGGCTAGAGACAGTGAAGCATGACGCAGACAGAGACGAGGAATCTCTTCAACAGGTTTTGGTGACAAATGAGATTAGAAAGCAGATAAATGTGGTCAAACTGATGCTGGGGTCCATGGAAGATGGAGAGATAAGCATCTCAGCTTATGACACTGCATGGGTTGCTCTTGTGAGAAATGTTCATAATGGAAATGGCCCTCAATTCCCGTCTTGTCTTGATTGGATAGCCAATAATCAGCTCCCTGATGGTTCATGGGGAGATGAATTATTCACTGCCCATGATCGGATTCTTAACACCTTAGCTTGTGTTATTGCATTGAGAGCGTGGAACATGCACCCTGAAAAGTGTGAAAAGGGATTGACATTCTTCAAAGAAAATCTACACAAGCTTCAGGATGAGAATGAGGAGCATATGCCAATTGGGTTCGAAGTTGCTTTCCCTTCTCTTCTCGATTTAGCTCAAAGTATGGATATTGAAGTGCCAAATGATTCTCCTATCTTGAAAGACATCTATGCCTTGAGAGAACTAAAGCTCAAAAAAATACCAAGAGATGTGATGCACAAGGTGCCCTCAACACTGCTCCATAGTTTGGAGGGAATGCCAAATTTGGACTGGGAACGACTTCTAAAGCTGCAGTCTCAAGACGGATCATTCTTGTTCTCTCCATCATCCACAGCCTATGCACTCATGCAGACCAAAGATGAAAATGCTCTCAAATACCTTGACAAAACTGTAAAGAGGTTCAATGGGGGAGTTCCAAATGTGCATCCAGTGGATTTGTTTGAACACATCTGGGCTGTTGATCGGCTGGAACGTCTAGGAATTTCGAGATATTTTCAGCCAGAGATCAAGGACTCTATCAATTATGTTTCAAGATATTGGGCGGAGAATGGTATTTGTTGGGCAAGAAATTCGGAGGTTCAAGATATTGATGATACAGCAATGGGATTTAGACTGCTAAGGTTACATGGTCACCAAGTTTCTCCCGATGTGTTCAATCATTTCGAGAAAAGTGGTGAGTTCTTCTGCTTTGCTGGGCAATCAACCCAAGCTGTGACGGGAATGTTCAATCTTTATAGAGCTTCTCAAGTGCTATTTCCTGGGGAGAAGATTCTCGAGGATGCCAAGCACTTCTCATCCAAATTTTTAACTGAGAAACGTGTTGCTAATGAACTATTAGATAAATGGATCATAACCAAAGATTTACCCGGTGAGGTTGGTTACGCGCTAGACGTGCCATGGTATGCTAGCTTACCCCGATTGGAGACTAGATTTTACATTGAACAATATGGTGGCAAAGATGATGTTTGGATTGGCAAGTCACTTTATAGGATGCCCTACGTGAACAATGATGTTTATCTTGAGCTTGCAAAATTGGATTACAACAAATGTCAAGCAGTGCACTGTGCAGAATGGGACAAAATCCAAAGGTGGTACTCGGAAACAGGTTTGGAAGAGTTTGGGTTGAGCGAAGAGAGGCTTCTGGTTGCTTATTTTGTGGCAGCAGCCAGCATATTTGAGCCTGAGAGGTCTCTAGAGCGACTAGCATGGGCTAAAACAGCAGCATTGCTCGAGACGCTGACATCCTACATTAAGGATGAAGAAACAAGAAGCGCATTTGTAGATCAATTCAATAACAACATTTGCAGACAAGACTTCTTAAACAAGAGGTTGGAGAAGAATACTACCAAAGAAGATCAACTCCTTGGGATTTTGATGATGACCCTTGATTACATTGGGTTGTTGCTGTTTCGGTGTCATGGTCAAGAAATTTCCCAATATTTGAATCTAGTTTGGCAAAGCTGGCTGTCAAGTTGGCAAAATGAAGGAAGTAGTTCCCAAAGAGAAGCCGAGCTGCTTGTGCAAACCATAAATTTAATGACTGGATGTTGGTCAGAAGAGCTACAGCTCCTTCCTCAGTATCAGAGAATGCTTGAAGTCACTAACAAAGTCTGCCATCGGCTCCGAAATTATCAAAGCAACAAGGCACCTGAGAGTGGCAGCAGCAACCTGAGTACAATCGGCATCACTACCCCTCTAATAGAATCAGAAATGCAAGAGCTTGTGCAAATTGTGCTCCGAAATTCCTCGGATGGCATACAAATACACTCCAATATTAAGAATTCATTCCTCATAGTGGCCAAGAGTTTCTACTATGCAGCCTACTGTGACCCAGAGACCATTACTTCTCATGTTGACAAAGTTCTGTTTCAAAAAGTGATGTGA 2292 0.4271 MTSQLSFNPIHASPTESVTYCKWLETVKHDADRDEESLQQVLVTNEIRKQINVVKLMLGSMEDGEISISAYDTAWVALVRNVHNGNGPQFPSCLDWIANNQLPDGSWGDELFTAHDRILNTLACVIALRAWNMHPEKCEKGLTFFKENLHKLQDENEEHMPIGFEVAFPSLLDLAQSMDIEVPNDSPILKDIYALRELKLKKIPRDVMHKVPSTLLHSLEGMPNLDWERLLKLQSQDGSFLFSPSSTAYALMQTKDENALKYLDKTVKRFNGGVPNVHPVDLFEHIWAVDRLERLGISRYFQPEIKDSINYVSRYWAENGICWARNSEVQDIDDTAMGFRLLRLHGHQVSPDVFNHFEKSGEFFCFAGQSTQAVTGMFNLYRASQVLFPGEKILEDAKHFSSKFLTEKRVANELLDKWIITKDLPGEVGYALDVPWYASLPRLETRFYIEQYGGKDDVWIGKSLYRMPYVNNDVYLELAKLDYNKCQAVHCAEWDKIQRWYSETGLEEFGLSEERLLVAYFVAAASIFEPERSLERLAWAKTAALLETLTSYIKDEETRSAFVDQFNNNICRQDFLNKRLEKNTTKEDQLLGILMMTLDYIGLLLFRCHGQEISQYLNLVWQSWLSSWQNEGSSSQREAELLVQTINLMTGCWSEELQLLPQYQRMLEVTNKVCHRLRNYQSNKAPESGSSNLSTIGITTPLIESEMQELVQIVLRNSSDGIQIHSNIKNSFLIVAKSFYYAAYCDPETITSHVDKVLFQKVM* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2421 763 Pfam Terpene synthase family, metal binding domain 476 632 IPR005630 GO:0000287|GO:0010333|GO:0016829
Dod01g2421 763 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 70 252 IPR008930 -
Dod01g2421 763 Gene3D - 70 281 - -
Dod01g2421 763 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 237 457 IPR008930 -
Dod01g2421 763 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 36 760 - -
Dod01g2421 763 Gene3D Farnesyl Diphosphate Synthase 486 763 IPR008949 -
Dod01g2421 763 Pfam Terpene synthase, N-terminal domain 226 432 IPR001906 GO:0010333|GO:0016829
Dod01g2421 763 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 41 466 - -
Dod01g2421 763 SUPERFAMILY Terpenoid synthases 471 747 IPR008949 -
Dod01g2421 763 Gene3D - 54 484 IPR036965 GO:0010333|GO:0016829
Dod01g2421 763 SFLD Terpene Cyclase Like 1 N-term 41 466 - -
Dod01g2421 763 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 36 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2421 Dod-Chr1 63051687 63056150 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2421 K04120 - gmx:100807519 1160.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2421 01 63051687 63056150 Dod01g2421 01 63051687 63056150 ECH