Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2420 ATGGAGCTAAGCAAAGTGACCCTAGAGATCTTCTCCAAACTCGAGCAGCAATGGCTCTCCCACTACGAAGCCACCGCCAAAACTCGCATTCTCAGCATAGACGGCGGAGGCACCACCGCCACCGTCGCCGGCGCCGCCCTCGTACACCTCGAGGACCAGATCCGCGCCAAAACCTCCGATCCCCACGCTCAAATCGCAGATTTCTTCGACATCGTCGCCGGCACCGGCATTGGTGCCATCCTCGCCTCCATGATCACCGCCGACGACGGGTTCGGCAGGCCTCTCTACACCGCCAGAGAAGCCGTCCGCCTCATCGCCGACAGAAACCACGAGCTCTACAGGCTCAAACACTCCGGAATCTTCCGCCGGCGCCGGAGATTCTCCTCGAAGAGCATGGACAGCGTGTTGAAGCAAGTGTTCACGAGAAAAGAGGAAGGAAGGTTGTTGACCTTGAAGGACACGTGTAAGCCATTGCTGATCCCTTGCTTCGACCTCAAGAGCTCCGCGCCGTTCGTGTTCTCCCGAGCCGACGCGTCCGAGTCGCCGAGCTTCGACTTCGAGCTCTGGACGGTGTGCCGCGCCACGTCAGCAACGCCGAGCTTCTTCAATCCCTTCCGCTTCGCCTCCATGGACGGAAAGACCTCATGCTCCGCAGTCGACGGCGGCCTCGTCATGAACAATCCGGCGGCCGCCGCCGTCACGCACGTCCTCCACAACAAGCGCGACTTCCCGTCGGTGAACGGCGTGGAGGACCTCCTCGTCCTGTCCATCGGGAACGGAGCGCCGGCGAAGAAGGTCCGCGACGTCAGCGAATGCTCCACGTCGTCGGTGGTCGACATTGCCATCGACGGCGTTTCCGAGACCGTTGACCAGATGCTCGGGAACGCCTTCTGTTGGAACCGTACGGACTATGTCAGAATCCAGGCGTTCGGTTTGGAAGAGGCGGTGCTGAAGGAGAGGGTGCTGGACTCGTTACCGTTTGGCGGGAAGCGGTTACTGCAGGAAACTAACGGAAACAGAATCGAGAGCTTTGTGCAGCGTCTCGTTGCTACCGGAAAAGCTAGCCTACCACCTAGTCCCTGCAAGGTTCCGCCGTGA 1098 0.6038 MELSKVTLEIFSKLEQQWLSHYEATAKTRILSIDGGGTTATVAGAALVHLEDQIRAKTSDPHAQIADFFDIVAGTGIGAILASMITADDGFGRPLYTAREAVRLIADRNHELYRLKHSGIFRRRRRFSSKSMDSVLKQVFTRKEEGRLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFDFELWTVCRATSATPSFFNPFRFASMDGKTSCSAVDGGLVMNNPAAAAVTHVLHNKRDFPSVNGVEDLLVLSIGNGAPAKKVRDVSECSTSSVVDIAIDGVSETVDQMLGNAFCWNRTDYVRIQAFGLEEAVLKERVLDSLPFGGKRLLQETNGNRIESFVQRLVATGKASLPPSPCKVPP* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2420 365 CDD Pat17_PNPLA8_PNPLA9_like 30 309 - -
Dod01g2420 365 Gene3D Cytosolic phospholipase A2 catalytic domain 18 356 - -
Dod01g2420 365 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Dod01g2420 365 PANTHER PATATIN 2 365 - -
Dod01g2420 365 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Dod01g2420 365 PANTHER PATATIN-LIKE PROTEIN 6 2 365 - -
Dod01g2420 365 SUPERFAMILY FabD/lysophospholipase-like 27 315 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2420 Dod-Chr1 63035363 63037118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2420 1 362 Acyl Lipid Metabolism Gene Families AT3G63200 70.161 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2420 - - gmx:100806989 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2420 01 63035363 63037118 Dod01g2420 01 63035363 63037118 ECH
Dod01g2420 01 63035363 63037118 Dod07g0554 07 7326212 7327741 PCT