Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2418 ATGGTAATGAGTGTTCAGCTATCAGGTTTGTGGGTGCCCAATTCTCCAGCGACAACAATCCCTGGAGGACTCCATGTTCCCAGCGGAGGAGGCAGGTTATCCCCTTCAGCTCTCGCTGCCACACCAAATCTCTCTTCCCATTCTCCCACCATTCAGATAGTTGGAGTGAATGGCCGTGGTTGGAGTGAAAATGGATTTGCCAATCTGAGCAGCAACACATTTGATGGCTGCCAAGAAGAGGCTGATTATTGGAGTAATCTTGACACTGATCTTTATCACTGGACTAAGGCCTTACGCCCTGTGCAGTGGTTTCCTGGTCATATTGCAAAAGCAGAGAAAGAACTGAAGGAGCAGCTCAAGTTGATGGATGTTGTGATAGAGGTGCGAGATGGCAGAATTCCTATGTCCACAAGTCATCCACAGATGGATCTATGGCTTGGTAATAGAAGGAGGATTTTGGTTTTAAATAGAGAAGACATGATATCGACTGCAGACCGCAATGCCTGGGCAGCTTATTTTGCTAGGCAAGGCACAAAGGCTGTCTTCTCCAATGGGCAACTTGGAATGGGCACAATGAAGCTAGGCCGGTTAGCAAAGGAATTAGCCGCTGATGTAAATGTTAAACGCAGAGCCAAAGGACTGCTTCCTCGTCCGGTTCGAGCTGGCATAGTTGGATACCCTAACGTTGGAAAATCATCTTTGATAAACCGTTTGTTAAAGCGAAGAAAGTGCCCAGCAGCTCCTAGACCAGGAGTCACGAGAGAATTGAGGTGGGTTCGTTTTGGCAAAGATCTTGAACTGCTGGATTCTCCTGGCATACTCCCGATGAGAATCAGTGACCAGTCAGCTGCAATAAAACTGGCCATATGTGATGATATAGGAGAGAGGGCCTATGATGTGGTTGATGTTGCTGCAATTCTTGTGCAGATGCTTACGAAGCTTCCTGCAGTAGGTGGAGATCCTCTTCGCAAACGATACAAGATTGATGTAGATAGTCAATGTGGTAAAACATTCGTAGAGAAGCTTGCACTCCAAGTATTTAATGGGAATGTCCAACAAGCAGCGTTCCGAGTCCTGGCAGATTTTAGAAAAGGCAGGTTTGGTTGGACTGCACTCGAGAGGCCTCCTAGATGA 1134 0.47 MVMSVQLSGLWVPNSPATTIPGGLHVPSGGGRLSPSALAATPNLSSHSPTIQIVGVNGRGWSENGFANLSSNTFDGCQEEADYWSNLDTDLYHWTKALRPVQWFPGHIAKAEKELKEQLKLMDVVIEVRDGRIPMSTSHPQMDLWLGNRRRILVLNREDMISTADRNAWAAYFARQGTKAVFSNGQLGMGTMKLGRLAKELAADVNVKRRAKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRKCPAAPRPGVTRELRWVRFGKDLELLDSPGILPMRISDQSAAIKLAICDDIGERAYDVVDVAAILVQMLTKLPAVGGDPLRKRYKIDVDSQCGKTFVEKLALQVFNGNVQQAAFRVLADFRKGRFGWTALERPPR* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2418 377 PANTHER DAR GTPASE 3, CHLOROPLASTIC 34 377 - -
Dod01g2418 377 TIGRFAM GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 101 373 IPR019991 -
Dod01g2418 377 Pfam 50S ribosome-binding GTPase 221 291 IPR006073 GO:0005525
Dod01g2418 377 CDD YlqF 103 274 - -
Dod01g2418 377 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 291 IPR027417 -
Dod01g2418 377 Gene3D - 101 274 IPR027417 -
Dod01g2418 377 PRINTS GTP1/OBG GTP-binding protein family signature 267 282 IPR006073 GO:0005525
Dod01g2418 377 PRINTS GTP1/OBG GTP-binding protein family signature 221 241 IPR006073 GO:0005525
Dod01g2418 377 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 34 377 - -
Dod01g2418 377 Gene3D - 279 367 IPR023179 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2418 Dod-Chr1 62965965 62969955 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2418 K19828 - gmx:100784201 607.446