Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2412 ATGGAAGCAACAACGCGATTCTCCTCCCACAATCACTTCCAACCACACACCTTCTTCGCAACCACACCCAGCACAACACTTCCAGTAAGACACGCACGACGCATCCAATTTCACCGTATAAGCTGCAATGAAGCTAGGGTTTCGCTCCACACAATCCCTTCGTTCACCACAATCACTTTTCCTTCCCTAAACCGCTCACTGTCTTCGAAACTGAACCGGCGGTTTTCCGTTAACGTCTCCGACCGGGTTCGGAGCGATTGCGCGCACGTCGACGCGCCGAACAGCGACCTTTCGAGTCTGGAAATTGTTCCTCCGACGATTAATGGCGGCGACGGCGGGGAAGCGATTATTGCCGCTCCGGGCCCAAACGACGCGAGAAGCATGCGGTTCAAAGCTAGAACGTTCAAGAATAGGTTTTTGAATTTTGTGCGCTTGGGCTCTGTGATTAACGATGCGGCGGAATCGTTTTTCAAGAGCGAGATAAGGAGGAGGTTGTTCGTGACTGCTGTGTTGATTGTGGTTAGCCGTGTCGGTTATTTCATCCCTCTTCCCGGGTTTGACAGAAGGTTGATACCGCAAGACTACCTCAGCTTTGCCACAGGAACTGTTGATGAACTTGGTGACTTCTCCTATGAGCTCAAGTTATCTCTTTTCCAGCTTGGGATCAGTCCCCAGATAATAGCGTCCATCATTATGCAGGTACTGTGTCATGTTGTTCCTTCTCTGGTAAAGCTGCGGAAAGAAGGTCTGGATGGACATGAGAAGATTAAGAGTTATATATGGTGGATGTCACTGGGCTTTGCCATTTTGGAAGCTTTCATAGTTTCTTGCTACTCTCTTCCATATTCAATTTACACTGCTAGTTATAGGGTCAAACATGTGATGGTGACAACTTTTTTATTGGTTTGTGGTGCAATGACTATTACGTGGATATGTGATACCGTATCAGAATCTGGATTTGGTCAGGGCTCATCTCTCATCATATGTGTGGGAATATTGACGGGTTATATAGAGACATTACACAAAATGATCACTCAGCTTTCAGTGAGTGCTGTGAGTTGGTGGCAATATTTGCTTGCAGTGTTGGGTATTTTCACCACAGTCACTATGTGGGCAGTTGTAGTAACAGAAGGTTGCAGGAAAGTAAAGCTTCAGTACTATGGTTTTAAACTTGCTTCTGCTGCAAGGGAGCAATCACCAATTACGGAAGTGGAGCCCTATATTCCTTTCAATATCAATCCGTCCGGAATGCAACCTGTTCTCACCACCTCTTACCTCTTGGCATTTCCAAGCATTCTCGCAAGTCTGCTTCAATCTCCTTTCTGGGAACGTATTAAGGAGATATTGAACCCTGAAACTTCTGTTGGTGCTGAGCCATGGGTGTACTATTCCATATATGCTTTTTTTGTCTTCCTATTCAATATATTTGATATTGCGAATTTGCCAAAGGAAATTGCTGATTACTTAAATAAGATGGGTGCAAGAATACCAAACATAAAGCCTGGAAAGGCTACTATAGAATACCTCACAAAGGTTCAGGCATCCACACGATTTTGGGGTCTGTTACTGGTGAAAGACTGTAATTTTTGCCTTATTTTAATCCAGTTCTTTCTATTACTTAATGTTGGTTTGCTACTTCGTTGA 1644 0.4465 MEATTRFSSHNHFQPHTFFATTPSTTLPVRHARRIQFHRISCNEARVSLHTIPSFTTITFPSLNRSLSSKLNRRFSVNVSDRVRSDCAHVDAPNSDLSSLEIVPPTINGGDGGEAIIAAPGPNDARSMRFKARTFKNRFLNFVRLGSVINDAAESFFKSEIRRRLFVTAVLIVVSRVGYFIPLPGFDRRLIPQDYLSFATGTVDELGDFSYELKLSLFQLGISPQIIASIIMQVLCHVVPSLVKLRKEGLDGHEKIKSYIWWMSLGFAILEAFIVSCYSLPYSIYTASYRVKHVMVTTFLLVCGAMTITWICDTVSESGFGQGSSLIICVGILTGYIETLHKMITQLSVSAVSWWQYLLAVLGIFTTVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPSGMQPVLTTSYLLAFPSILASLLQSPFWERIKEILNPETSVGAEPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNIKPGKATIEYLTKVQASTRFWGLLLVKDCNFCLILIQFFLLLNVGLLLR* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2412 547 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC 139 524 - -
Dod01g2412 547 SUPERFAMILY Preprotein translocase SecY subunit 147 524 IPR023201 -
Dod01g2412 547 Pfam SecY 216 524 IPR002208 GO:0015031|GO:0016020
Dod01g2412 547 Gene3D SecY subunit domain 148 546 IPR023201 -
Dod01g2412 547 PRINTS Preprotein translocase SecY subunit signature 460 482 - -
Dod01g2412 547 PRINTS Preprotein translocase SecY subunit signature 165 183 - -
Dod01g2412 547 PRINTS Preprotein translocase SecY subunit signature 415 434 - -
Dod01g2412 547 PRINTS Preprotein translocase SecY subunit signature 256 279 - -
Dod01g2412 547 PRINTS Preprotein translocase SecY subunit signature 291 316 - -
Dod01g2412 547 PRINTS Preprotein translocase SecY subunit signature 317 340 - -
Dod01g2412 547 PRINTS Preprotein translocase SecY subunit signature 215 235 - -
Dod01g2412 547 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 139 524 IPR002208 GO:0015031|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2412 65 524 Miscellaneous Gene Families AT2G31530 72.609 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2412 - - aip:107617671 817.764