Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2407 ATGACCAAGATCACAGCTTCACCACATGATTCTGTGGACACCACAACAACTACCCACTTGGATTTCTTCAAGAGATTCAAGAGGTTCAGCCCTCTAGAACGTTCTCTGGGCATAGCCAGCTTCTTCCTCGTGACCCTTCTCTTGTTCCTTGGCTGCTTCTCCTACGTCGATTTCAAGGGCTTGCGGTCTCAGGGCTCCGCCTTGCTCGGCCTCCACGTTCCCTCTTCTTCTTCTTGTTCTTCTTCTTCTTCTTCTAATGCTCCACAAGTTGTTGAGTTTCTGGAACAAGAAGGTGATAGCTGTGACGTGTTTGAAGGGAACTGGGTTTGGGATGAGTCCTACCCTCTCTACGATTCCATCAATTGTTCCTTCGTTGATACGGGTTTTCGATGCTTGGAGAATGGCAGGCCTGATAGCTTCTTTACCAAGTGGCGATGGCAGCCCAAACATTGCAACTTGCCCAGATTTAATGCAAGGAACATGTTGGAAACGCTACGTAACAAGCGGCTAGTTTTTGTTGGTGATTCACTTGGAAGGAACCAATGGGAATCACTTCTTTGCATGCTATCTTCTGTCATCGCGAACAAGAGTGCTGTCTATGAGGTTAATGGGAACCCGATTACAAAGCACTCAGGCTTCTTGTGTTTCAAGTTTGAAGAGTTCAACTGCACCATTGAGTACTACAGATCAACATATCTAGTGGTGCAGGGACATCCTCCTTCTGGGGCGCCTGAAAATGTGTCGTTGACTTTGAGATTGGATGTTATGGACTGGTCTTCTCGTTGGTGGAAAGATGCAGATGTGCTGGTTTTGAATACCGGACATTGGTGGACTAATCAGAAGACTGTAAAAGTGGGATGTTACTTCCAAATAGGAGACAAAGTGAATATGAAGATGAATATACAAGATGCATTCAGAAAAGCAATTGAAACCATGGTTGATTGGATTACCAGAGAAGTAAACACGAACAGTACATATGTCCTCTTCCGCACTTATTCTCCTGTGCATTTCAGGGGTGGTGACTGGAACACTGGTGGTGGTTGTAACTTGGAAACGCTACCTGATTTAGGTTCCTTGCCAGAAGTAAACGACCGTCATTCCAGAGCCGTCTTTAATGTCTTGTCAGAAAACGCCAATAAATCAGGAGTCATGAATTTGGACTTGCTAAATATCACCCAAATGACATTACGCAGAAAAGATGGCCATGCTTCTGTTTACCATCGTGGTCCAGGCCGCAAGGCCCCTATACAGCTGCAAGACTGTAGCCATTGGTGTCTGCCCGGTGTTCCTGATTCTTGGAATGAAATTCTTTATGCACTTATTCTCAAGAGAATGGCTATTTGA 1344 0.4524 MTKITASPHDSVDTTTTTHLDFFKRFKRFSPLERSLGIASFFLVTLLLFLGCFSYVDFKGLRSQGSALLGLHVPSSSSCSSSSSSNAPQVVEFLEQEGDSCDVFEGNWVWDESYPLYDSINCSFVDTGFRCLENGRPDSFFTKWRWQPKHCNLPRFNARNMLETLRNKRLVFVGDSLGRNQWESLLCMLSSVIANKSAVYEVNGNPITKHSGFLCFKFEEFNCTIEYYRSTYLVVQGHPPSGAPENVSLTLRLDVMDWSSRWWKDADVLVLNTGHWWTNQKTVKVGCYFQIGDKVNMKMNIQDAFRKAIETMVDWITREVNTNSTYVLFRTYSPVHFRGGDWNTGGGCNLETLPDLGSLPEVNDRHSRAVFNVLSENANKSGVMNLDLLNITQMTLRRKDGHASVYHRGPGRKAPIQLQDCSHWCLPGVPDSWNEILYALILKRMAI* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2407 447 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 153 439 IPR026057 GO:0016740
Dod01g2407 447 Pfam PMR5 N terminal Domain 100 152 IPR025846 -
Dod01g2407 447 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 26 443 - -
Dod01g2407 447 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 26 443 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2407 Dod-Chr1 62801617 62806248 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2407 - - gmx:100779356 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2407 01 62801617 62806248 Dod01g2407 01 62801617 62806248 ECH