Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2394 ATGTTGCTGTTGAGGCTTGGTGGGAAGGGGTTCCAGTTCCAAGCGGAGCACATAATCGTGTACGATGCTGAGGATATCCCGTTTGGTACGCTGTGGTGGTTTGTTTATGCGGGAATTTCTTGCTTACTTGTCCTGTTTGCTGGGATTATGTCTGGTCTCACACTTGGCTTGATGTCTCTTGGACTCGTTGACCTCGAAATTCTCCAGAGGAGCGGCACCACCACCGAGAAAAAACAAGCTGCTGCTATCTTGCCGGTTGTTCAGAAACAGCATCAGTTGCTTGTCACCTTGCTTCTTTGTAATGCATGTGCCATGGAGGCACTTCCTATTTACCTTGATAAAATTTTTCATCCTGTTGTTGCAGTAATTTTATCTGTGACTTTTGTTCTAGCTTTTGGAGAGGTTATTCCTCAATCTATATGCTCAAGATATGGGCTCTATGTTGGTGCAAATTTTGTGTGGCTTGTACGTGTACTGATGATAATATGTTATCCAATTGCTTACCCTATTGGAAAGGTTCTGGATGTTTTACTAGGACACAATGATGCACTGTTTAGGAGAGCACAATTGAAAGCCCTTGTTTCAATCCATGGCCAAGAGGCTGGTAAAGGTGGTGAGCTCACACATGATGAGACAACAATTATCAGTGGAGCACTCGATCTCACTGCGAAGACTGCAGAGGAGGCTATGACACCAATTGAATCTACGTTTTCCTTGGATGTTGCTTCCAAATTGGACTGGGAAGCAATTGGGAAAATTCTTGCACGAGGCCATAGTCGTGTACCTGTATATAGTGGAAACCCCAAAAATATAATTGGCCTCTTACTAGTAAAAAGTCTTCTTACTGTAAGAGCTGAAACCGAGACTCCTGTTAGTGCTGTTTCCATCAGGAGAATTCCTAGGGTTCCATCCGATATGCCTTTATATGATATCCTCAACGAGTTTCAAAAAGGAAGCAGCCATATGGCAGCTGTAGTCAAGGTTACAAGAGAAAGAAACAACCCTCAGGCTGCTGGTGAAATTGAGGCCATGAAACAAAATTCTCAACTAACTACACCATTGCTAGCCAAGTCTTCGGACAAATCAAAAAATGTTGTTGTCAATATTGACAAGCTTCCTAGGCATGCTACAGACCAACAATATCCAAAAAATGGCGCTACAACAAACGGTATGCACCACTGTCCTGATAATGCTGAAGATGGGGAAGTTATTGGCATCATAACCCTGGAGGATGTTTTTGAAGAACTCCTGCAGGAAGAAATTGTGGATGAAACTGATGTATATGTAGACGTACATAGAAGAATACGTGTAGCTGCTGTTGCAGCCGCTTCATCTGTGGCACGAGTTCCATCTGGCCGAAAGTTGACGGGTCACAAGCCTGTGGGGAATCAAGCAAGCAGGTGA 1404 0.4373 MLLLRLGGKGFQFQAEHIIVYDAEDIPFGTLWWFVYAGISCLLVLFAGIMSGLTLGLMSLGLVDLEILQRSGTTTEKKQAAAILPVVQKQHQLLVTLLLCNACAMEALPIYLDKIFHPVVAVILSVTFVLAFGEVIPQSICSRYGLYVGANFVWLVRVLMIICYPIAYPIGKVLDVLLGHNDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTAKTAEEAMTPIESTFSLDVASKLDWEAIGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKVTRERNNPQAAGEIEAMKQNSQLTTPLLAKSSDKSKNVVVNIDKLPRHATDQQYPKNGATTNGMHHCPDNAEDGEVIGIITLEDVFEELLQEEIVDETDVYVDVHRRIRVAAVAAASSVARVPSGRKLTGHKPVGNQASR* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2394 467 ProSiteProfiles CNNM transmembrane domain profile. 29 211 IPR002550 -
Dod01g2394 467 Pfam Cyclin M transmembrane N-terminal domain 39 210 IPR002550 -
Dod01g2394 467 Gene3D - 374 424 IPR046342 -
Dod01g2394 467 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 17 462 IPR045095 GO:0010960
Dod01g2394 467 PANTHER BNAC05G01850D PROTEIN 17 462 - -
Dod01g2394 467 Gene3D - 211 344 IPR046342 -
Dod01g2394 467 CDD CBS_pair_CorC_HlyC_assoc 225 326 IPR044751 -
Dod01g2394 467 SUPERFAMILY CBS-domain pair 215 418 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2394 Dod-Chr1 62598000 62604348 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2394 K16302 - gmx:100777230 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2394 01 62598000 62604348 Dod01g2394 01 62598000 62604348 ECH