Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2393 ATGGCGCCCAGTCGCAGAAGGGGCGCCAAGAAGAAGGCTGCCGCAGTCGCTGCCAAACGGCAGTGGCAGGTTGGTGATCTTGTGCTTGCCAAAGTCAAGGGCTTCCCTGCTTGGCCTGCCACTGTAAGTGAGCCGGAGAAGTGGGGTTACTCCTCAGATGGAAAGAAAGTACTTGTTTACTTCTTTGGGACCCAACAAATAGCGTTTTGCAATCCTGCTGATGTTGAAGCCTTTACTGAAGAGAAGAAACAGTCTCTTGCCAAACGCCAGGGAAGGGGTGCTGATTTTGTACGTGCAGTTAGGGAGATTATTGACTGTTATGAAAATTTGAAGAGAGAGACCCGAGTTAATGAAGTCTGCTCTAGTGGTGAAGTTGCTAATGTAGATGTCTCAAAGCCAGTTGACCCATCTGCAAACTTAAAGGATCGGACAGGTGCTTTTTTCACACTTAATTCACAAATTAAATCTTCAAATTTTGTGATTGACAGGCATGAACTAATTTGTGCAGCTGAGGATGGATCCCCTATTGCACTTAGGGATGAATCTCGTAATAAGGAGGCATCATTTGAAGAACCTACTGATGTTGTTGTGACTTCTCCGAAAAGATATAAGGACTTTGACCAGGAGGCCCATGTAATTATGCAGAGAAACGCATCAGTTCGACAATCTAGAAGCTCATTGCGGGTCCAAAATTTTGTTGTACCTTGTAGTGATGGTGAAAATAGTGTTGGTAACATATCAGCTGATGCAGCTCACAATGTGCCTGTAAGAAGCACTAAATGTTTCAAGAAATCACCTAATCGTTTTGGATATGATGATGCTGATTCGTCTGCATTTGCCTCAAATGTCAGCTTGGAAGACAATGATTCTGAAGTTATTGCTATTGATTCTGATGCCTTTAGCCTACATGAGGGAAATACAATAGATTCTAATTTTAAAGTTGGGGACACTGAGACTATTGAGTATCCTGAAGGTGAAATTGAGTTGAACAAAGGGCTTGAACTTGAAATTAAGGCTGTATTCAATAAGAAGAAAAGAAAACCAAACAGGAACACAACAACTAATGATTCTACCACTCCAACCATTCAGCTAGAGGAGGAGCTTGGTTCTCAGAATGCCAATTACAGTTTGCAGAGTATGTGTAGAACTACAATCGAGAAATGCTTTGAGCAAGATGGAGACAAACTCTTGCCCCTGTCAAAACGAGCTAGAGTTAGAAGGGTTCAATCATCCATGGACACAGAGCTCAATAGTGTTGTGCAAGCTCAAGAGAAAAGCTATAAGGAAGATATTACCAACTCACCACAGCGGACAATAACATCTTCAAATGGTGAAAATGGTAGCCATCCTAATGGGGACTCATTAGCATTGAATGGAGATTCGTCTCACATTTCTTTTTCAAAGTCATTAGCTTCGTCTTCTGAAAGTGGATCTCAGATTTGTAAAAGTAAGAAAGAGCAAATATTTGGCCGCTCTATGGATGGTGAAGCTACTCTACCTCCATCAAAACGCCTCCATCGTGCTTTAGAAGCTATGTCTGCTAATGCTGCTGAAGAAGGTCAAGCTTGCAAGGAATCATCTTCCTTTGTAATGACATCGGATGGTAGATGTTGTATATCTTCCAACAAGAAATCCTCTTGCATGACTACTAATAATAGTAAAGGAGGTAATGATGAGCTACAAGGGTTGGATTCTTGTGGTGTCGATTGTTCTCATAACAATGTATCTAGCTTCTCAACCAATTCAAATCCATTGATTTCAACAGAAAATAAGTCATCTTCTGAAGTGGATAAGCAGTTGATGAACTGCCAGTCGCATGAAACTGGCAAGGATATCATCCCGGATGCTAGAAATCAAGTTGGTGAAGATCTTAATGATTCTGTGGTCTATCAAACTGCTAAAACAGATTCACGAATTCAGCTACATGGAAAAATGTCTCCCAATCTTGATGTGAAATGTTGTGAAGTTGGAAGCAATCAAGATTCACCGGGTTCATCATTGCCACCAATCGACGATGACAATACCAGACCTGTGAACAATTCAAATGCATCTGATATATCAGAACATAATAGAATAAGTCTTGATCCTGTGGCAGGTCCCAACGAAAGTGGTAAATTGATGCCTCAAAATAGTATTAATGTGTATCAGAACAAGGTCATTTGTGAGGATACTCAGTGCTTGAAGCAAGTAGTTGATGGCAGCAGCAGAATTAAAAACATGGATGAGGCTGTGAAAGGGGTGAAAAATTCAGGAAAAGAAGAGGATATGAATTCAGCTTCAATATCCAATGATTGTTTAGGTGACAAGGGTACCTTGGGTATTCAGTCAAGTCCATCCTTGACTGATGGGGGAGGTGGCCTTCCACAAGGATCACCTCCAAATACATCAGTTTGCAATGTTTCTACATCAGACAGTAGTAATATTCTTCAAAATGGAAGTTGTAGCCCTGATGTACACCAGAAGAACACTTCATCTGGTCCTGTTGATGGATGGAAAGATGGGACTGTGGCAAATCAACAATCAAGATTGACAGGCAAGTCATCTGATGCAGGAAATGCTGCTTTGTTGTACTTTGAAGCAACCCTTGGGACATTGACAAGGACAAAGGAAAGTATTGGTCGAGCAACACGAATAGCTATTGACTGTGCAAAGTTTGGCATTGCAGCTAAGGTGATGGAAATTCTTGTCCACAGTCTGGAAACTGAGTCAAGCCTGCATCGGAGGGTGGATCTGTTTTTTCTTGTTGACTCTATTGCTCAATGTTCTCGTGGTTTCAAAGGTGATGTTGGTGGAGCATATCCATCTGCTATGCAAGCTGTCTTGCCACGCCTATTGTCTGCTGCTGCTCCTCCTGGACATACTGCACAAGAAAATCGCAGGCAGTGTCTTAAGGTTCTAAGGCTGTGGTTGGAGAGAAGAATCTTACCAGAATCCATTCTTCGCCGTCATATCCGGGAACTGGATTCATATAGCAGTTCAGCAGGGGTCTTCTCACGACGCACATTAAGGACAGAAAGGCCTTTAGATGACCCTGTCAGAGAAATGGAGGGCATGCTTGTCGACGAATATGGAAGCAACTCAAGTTTTCAGCTACCTGGATTTTGCATGCCTCGAATGCTTACAGATGAAGATGAAGGGAGTGATTCTGATGGAGGGAACTTTGAGGCTGTCACGCCTGAGCATGATTTTCAAATACATGAAGTGCCCGAAATGGCTCATGCAATTGAAAAACACAGGCGTGTGTTGGAAGACGTTGATGGTGAGCTTGAAATGGAAGATGTGGCTCCCTCTTTTGATGTAGAATTGAATTCAATTTGCAATGTAGATGGAGGTGATGCCTCACAGGTTGAGAAGAATCTTCATCTGTCCTTTATTCCTCCTCTTCAACAGGAGCTTCCTCTATCTTCCCCACCTCCACAATCGTCCCCTTCACCTCCACCTCCACCTCCACCTCCTACATTGCGCTTGATGTCAGCCACCTCTGGTCCATATCATGCTGCAGTTGGTTCAAAAGTTTTTGCAGATTCACAGACTATGAAAGACAACACCCTCCATTCTATGGCTGAACCCCTGGCTGCACCAAGAAAGAGCCAACCTATCAGTGATACAGTGCACTATCAAGTCCCAGAACAAAGAGACATGCATATGCAGATACCGGTACAATCACCACAAAATTTCCGGTGTTCTGATGGTGCTACCTTTCAAAACAAAGGCTACTCATTACGACCACCCCAACCTGTGCCATCCAATCAGTTTTCTTTTGTTCATGGGGAACGTGTGAAACCTCATAGGGACGCTCCACCACTGCCTTTACACTCCAATAGACACCACTTTCCTCAGAACATGAAGAGAGATAACTTTGCTAACAATCATGAGAGATCAAAACCACCTCCATATGATTACCCAGAGAGATGGAATTCTCCCATGCCTTATTCTGGTCCTCGATATCATGACAGAGGTGTGCGCGCCCCTTATGGTTGTCATCCATGTGAATCAACTATATTACCACCAGATCACAGGTGGAGGTATCCTCCCCAATCAATGAATCACTGGGACTCCATGCCTCCTTTTAGACCACCCTTTGACGATGCAGTTCCCATAGCTAACCGAGGCCCAAGCTATTGGCACCCAAGGTGA 4137 0.4324 MAPSRRRGAKKKAAAVAAKRQWQVGDLVLAKVKGFPAWPATVSEPEKWGYSSDGKKVLVYFFGTQQIAFCNPADVEAFTEEKKQSLAKRQGRGADFVRAVREIIDCYENLKRETRVNEVCSSGEVANVDVSKPVDPSANLKDRTGAFFTLNSQIKSSNFVIDRHELICAAEDGSPIALRDESRNKEASFEEPTDVVVTSPKRYKDFDQEAHVIMQRNASVRQSRSSLRVQNFVVPCSDGENSVGNISADAAHNVPVRSTKCFKKSPNRFGYDDADSSAFASNVSLEDNDSEVIAIDSDAFSLHEGNTIDSNFKVGDTETIEYPEGEIELNKGLELEIKAVFNKKKRKPNRNTTTNDSTTPTIQLEEELGSQNANYSLQSMCRTTIEKCFEQDGDKLLPLSKRARVRRVQSSMDTELNSVVQAQEKSYKEDITNSPQRTITSSNGENGSHPNGDSLALNGDSSHISFSKSLASSSESGSQICKSKKEQIFGRSMDGEATLPPSKRLHRALEAMSANAAEEGQACKESSSFVMTSDGRCCISSNKKSSCMTTNNSKGGNDELQGLDSCGVDCSHNNVSSFSTNSNPLISTENKSSSEVDKQLMNCQSHETGKDIIPDARNQVGEDLNDSVVYQTAKTDSRIQLHGKMSPNLDVKCCEVGSNQDSPGSSLPPIDDDNTRPVNNSNASDISEHNRISLDPVAGPNESGKLMPQNSINVYQNKVICEDTQCLKQVVDGSSRIKNMDEAVKGVKNSGKEEDMNSASISNDCLGDKGTLGIQSSPSLTDGGGGLPQGSPPNTSVCNVSTSDSSNILQNGSCSPDVHQKNTSSGPVDGWKDGTVANQQSRLTGKSSDAGNAALLYFEATLGTLTRTKESIGRATRIAIDCAKFGIAAKVMEILVHSLETESSLHRRVDLFFLVDSIAQCSRGFKGDVGGAYPSAMQAVLPRLLSAAAPPGHTAQENRRQCLKVLRLWLERRILPESILRRHIRELDSYSSSAGVFSRRTLRTERPLDDPVREMEGMLVDEYGSNSSFQLPGFCMPRMLTDEDEGSDSDGGNFEAVTPEHDFQIHEVPEMAHAIEKHRRVLEDVDGELEMEDVAPSFDVELNSICNVDGGDASQVEKNLHLSFIPPLQQELPLSSPPPQSSPSPPPPPPPPTLRLMSATSGPYHAAVGSKVFADSQTMKDNTLHSMAEPLAAPRKSQPISDTVHYQVPEQRDMHMQIPVQSPQNFRCSDGATFQNKGYSLRPPQPVPSNQFSFVHGERVKPHRDAPPLPLHSNRHHFPQNMKRDNFANNHERSKPPPYDYPERWNSPMPYSGPRYHDRGVRAPYGCHPCESTILPPDHRWRYPPQSMNHWDSMPPFRPPFDDAVPIANRGPSYWHPR* 1379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2393 1378 Pfam PWWP domain 25 107 IPR000313 -
Dod01g2393 1378 MobiDBLite consensus disorder prediction 656 692 - -
Dod01g2393 1378 MobiDBLite consensus disorder prediction 1129 1159 - -
Dod01g2393 1378 MobiDBLite consensus disorder prediction 1278 1299 - -
Dod01g2393 1378 SMART 558neu5 857 988 IPR006569 -
Dod01g2393 1378 CDD HDGF_related 21 103 IPR035496 -
Dod01g2393 1378 MobiDBLite consensus disorder prediction 656 689 - -
Dod01g2393 1378 Gene3D - 4 106 - -
Dod01g2393 1378 MobiDBLite consensus disorder prediction 1260 1305 - -
Dod01g2393 1378 SUPERFAMILY Tudor/PWWP/MBT 19 123 - -
Dod01g2393 1378 SMART PWWP_4 22 79 IPR000313 -
Dod01g2393 1378 MobiDBLite consensus disorder prediction 753 835 - -
Dod01g2393 1378 MobiDBLite consensus disorder prediction 747 835 - -
Dod01g2393 1378 ProSiteProfiles PWWP domain profile. 24 81 IPR000313 -
Dod01g2393 1378 Gene3D - 856 994 IPR008942 -
Dod01g2393 1378 MobiDBLite consensus disorder prediction 1131 1156 - -
Dod01g2393 1378 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1378 - -
Dod01g2393 1378 MobiDBLite consensus disorder prediction 407 460 - -
Dod01g2393 1378 MobiDBLite consensus disorder prediction 410 460 - -
Dod01g2393 1378 ProSiteProfiles CID domain profile. 850 991 IPR006569 -
Dod01g2393 1378 PANTHER PWWP DOMAIN PROTEIN 1 1378 - -
Dod01g2393 1378 Pfam CID domain 858 981 IPR006569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2393 Dod-Chr1 62553723 62564039 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2393 - - gmx:112997599 1595.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2393 01 62553723 62564039 Dod01g2393 01 62553723 62564039 ECH
Dod01g2393 01 62553723 62564039 Dod07g0519 07 6845643 6861797 PCT