Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2382 ATGCCCATGGCGGCTGTCCCATTACCTCGGACCGATCCACCGATGGCGGCGGCGCCGCCCGTTGTCGTGTCCGACTCCTTCGCCAAGGACGCCATCCTCGCCTGGTTCCGCGGCGAGTTCGCCGCCGCCAACGCCATCATCGACGCCCTCTGCGGCCACCTCGCCTCCACCGCCGTCGACTCCGACGACTACGACTCCGTGTTCGCTGCCATACACCGCCGCAGGCTCAACTGGATCCCCGTCATCCAGATGCAGAAGTACCACCCCATCGCTGACGTGGCTCTAGAGCTCCGCACGGTCGCCGAGAAGAAGAAGATGATGATGACGACGGAAGAGGAGAAAGCTGATGAGAGTGGTTTCGGTGACGAGAAAGGGAAAATGGAAGAGGAGGAAGTGAAGGAGGAGAGTGTTGGAAATGGAAGTGGTGAAGTTGAAGCTCATGAGGATCAGTTTGATTCTCTAGAGAGTGAGATTACTGATTCAGGATCTCAAGAAATGCATGCCAATTTGATGAACAATAATATATGTTCCAATCATGAAGAGTGTGAAGGACGCTCTTCACAGATAAAGTTGACAAAAGGTTTCCAAGCAAAGGAGTCGGTGAAGGGGCATATGGTGAATGTTGTGAAGGGATTAAAGTTATATGAGGACATTTTCACTGATTCAGAAATCTCTAAGCTTACTGATTTTGTGGATGAGATGCATTCTGCTGGCCAGAATGGGGAACTCTCTGGTGAAACTTTTATACTATTTAACAAACAGATGAAGGGGAACAAGAGAGAACTCATTCAGCTGGGTGTTCCAATATTTGGACAGATAAAGGACCATGCAAAAAGCAATCTGGAGCCAATTCCGGCACTTCTCCATGGTGTCATTGATCACCTTATTCAATGGAAATTAATTCCAGAATACAAAAGGCCAAATGGTTGTATCATCAACTTCTTTGAAGAGGGGGAATTTTCTCAGCCATTCCTGAAACCACCGCATCTGGATCAGCCTATATCCACCCTTCTTCTCATTGAATCAACTATGGCTTTTGGGCGTATCCTTGTGAGTGAAAGTGATGGGAACTACAAGGGGCCACTCATGCTCTCATTGAAGAAGGGGTCTCTTTTAGTGATGCGGGGAAATAGCGCTGACATGGCAAGACACGTCATGTGTCCATCCCCAAACAGAAGGGTCAGCATCACCTTCTTTAGAGTGAGGCCAGACTCTAATCAATGCCTATCACCAACAACACCAACTCCTACCATGACAACTGCGATGGCTATTTGGCAACCTGGCACTGCGAGCCCATATGCTGTCCCAAATGGAACTCCAAGGGGCTATGAGGCTATGGATATGATGCCCAGATGGGGAATACTTTGTCCTCCAATGGTCGTGCTAACCCCTATGCGCCCTACGGCATTGAACCCCCGCAAAGTTCCTCGTGGTGGGAGTGGAACTGGGGTTTTCTTGCCATGGAAGGTGCCATCCAGAAAACCTGCAAGGCATCTTCCGCCGCGTGCCCAAAGAGGGCAGCTTCTGGCATTACCTTCCCCAGTTGACTCGCACATGGGAGAGTCCACTTCTGAACCCGGCATTACAGTTGAAGGATAA 1599 0.5003 MPMAAVPLPRTDPPMAAAPPVVVSDSFAKDAILAWFRGEFAAANAIIDALCGHLASTAVDSDDYDSVFAAIHRRRLNWIPVIQMQKYHPIADVALELRTVAEKKKMMMTTEEEKADESGFGDEKGKMEEEEVKEESVGNGSGEVEAHEDQFDSLESEITDSGSQEMHANLMNNNICSNHEECEGRSSQIKLTKGFQAKESVKGHMVNVVKGLKLYEDIFTDSEISKLTDFVDEMHSAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKDHAKSNLEPIPALLHGVIDHLIQWKLIPEYKRPNGCIINFFEEGEFSQPFLKPPHLDQPISTLLLIESTMAFGRILVSESDGNYKGPLMLSLKKGSLLVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQCLSPTTPTPTMTTAMAIWQPGTASPYAVPNGTPRGYEAMDMMPRWGILCPPMVVLTPMRPTALNPRKVPRGGSGTGVFLPWKVPSRKPARHLPPRAQRGQLLALPSPVDSHMGESTSEPGITVEG* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2382 532 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 306 403 IPR005123 -
Dod01g2382 532 Gene3D - 194 408 IPR037151 -
Dod01g2382 532 MobiDBLite consensus disorder prediction 108 150 - -
Dod01g2382 532 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 12 530 - -
Dod01g2382 532 SUPERFAMILY Clavaminate synthase-like 201 402 - -
Dod01g2382 532 MobiDBLite consensus disorder prediction 511 532 - -
Dod01g2382 532 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 12 530 IPR044842 GO:0003729|GO:0006402|GO:0032451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2382 Dod-Chr1 62381338 62388677 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2382 K10767 - gmx:100796344 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2382 01 62381338 62388677 Dod01g2382 01 62381338 62388677 ECH
Dod01g2382 01 62381338 62388677 Dod07g0510 07 6707249 6715236 PCT