Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2381 ATGAATTTCTTCAAATCCGTTTTCTCCGACGACCCTGATCCTCCCGGATCGGAATCCGACAACAATGCGCCCCACCCTCAAAACGCACCGGATCGCGAAACCTCCACAACCACCGCCGCCGGCAGCTCCGTCGAGGGCGGCGGCGCGTGGAGATTCGGCGGCCTCCTGAAAGACCTAACCGCGAGATCCGAATCCATAATCGAGACCTACCGCCGCGACCTACAGGAATTCGGCACCGGCCTCAAGAAGGAAATCGAGGTCGCCCACGGCTCCCTCGAGACCGTTAGCCACGTCATCGACCACTTCGGATCCACCGTCGTCAAGGGAACCGCCCAGATCATCTCCCAAGGCAAAGACGCCATCCTAGCCGTTGATCTCGATTCCGATAACTACACCGGGAACTCCAGAACCAAACGCGCCAGCAGAGAGGGTAGCTTCAATTCGAAAGGGTACAGCAGGTTCGACGCTCAGGTTCGTGCTGTTCAGGGTGACGTCAGCACCTATTGTGAGGATCCTGAGGATTTGGATGAGTATAGGGAGTGGAAATTAGGGTTTTCATTGGAAGGGAAGGATGAGGAAATGATGGGGCTTTTGAAAGAGAATGAGGCTATGGAGAGTGCTTACGAGAGGGTTGTTCCGAATAGTGTTGATCGTGAGAGTTTCTGGTTTAGGTATTACTATAAGGTTTATAAGATGAAGAAAGCTGAGGATGTGATGGCTAGGCTTGTGAGGACAATGTCCATGGATGAGGAGGATTTGAGTTGGGACGTTGAAGATGATGATAGTGATGATGATGGTGGTGATGATTTGGAAGAAGAAGAGAGTGTGAGTAAGGGGATATCAGAGGGTGAGAAAATGGGAAGAGAGGGAGGTTCTGGGTTGCAAGATGGTAACTTTGACGAAAAGGGTGTGGTGGGTGCAAAGAGATTGTGTGTGGAAGAGGTGCATGGTTCTGGTGAGGTGGAGTCTAAGGTGGAAAAGAGAGAGAGTTTATTGCAAAGTGAAGAACTTCGTAATGACTCTGTTTTGGAATCTAAAGTTGAGGGTTCAGAAGTTGTTAAAGAGGTAGGTGATGGAAGAAGCTCAAGCAAGGAAACTATGAAGGAAGTGGATGATGACACTGGGAAGAAGAAAGACTCTGCAGCAGCGGCAGCGGGTTCTGATAAGAAAGTGATAATTGAAACCAAGGTTGAAGATGGAAAATCTCCGGTTGTTGCTGCGAGTAAGGCCTCAGCGCATGAGGAGCAGGAGGAAGAAGAGCTTGAGTGGGATGAGATTGAAGATCTCAGTCCTGTGGATGAGAAGAAGACAACAACTAAGAGTGGGAGCCCAAGCAAAGTTGATCTGCGGAAGCGCCTGAGTAGTGCAGAAGAAGAGGAAGACTTGGGTTGGGACATTGAAGATGTTGATGATGAGCCTGCAAAGGCTTGA 1431 0.4997 MNFFKSVFSDDPDPPGSESDNNAPHPQNAPDRETSTTTAAGSSVEGGGAWRFGGLLKDLTARSESIIETYRRDLQEFGTGLKKEIEVAHGSLETVSHVIDHFGSTVVKGTAQIISQGKDAILAVDLDSDNYTGNSRTKRASREGSFNSKGYSRFDAQVRAVQGDVSTYCEDPEDLDEYREWKLGFSLEGKDEEMMGLLKENEAMESAYERVVPNSVDRESFWFRYYYKVYKMKKAEDVMARLVRTMSMDEEDLSWDVEDDDSDDDGGDDLEEEESVSKGISEGEKMGREGGSGLQDGNFDEKGVVGAKRLCVEEVHGSGEVESKVEKRESLLQSEELRNDSVLESKVEGSEVVKEVGDGRSSSKETMKEVDDDTGKKKDSAAAAAGSDKKVIIETKVEDGKSPVVAASKASAHEEQEEEELEWDEIEDLSPVDEKKTTTKSGSPSKVDLRKRLSSAEEEEDLGWDIEDVDDEPAKA* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2381 476 SUPERFAMILY BSD domain-like 150 237 IPR035925 -
Dod01g2381 476 Gene3D BSD domain 139 242 IPR035925 -
Dod01g2381 476 PANTHER PROTEIN, PUTATIVE-RELATED 87 470 - -
Dod01g2381 476 MobiDBLite consensus disorder prediction 429 459 - -
Dod01g2381 476 MobiDBLite consensus disorder prediction 342 476 - -
Dod01g2381 476 ProSiteProfiles BSD domain profile. 181 233 IPR005607 -
Dod01g2381 476 SMART wurzfinal6 181 233 IPR005607 -
Dod01g2381 476 Pfam BSD domain 181 237 IPR005607 -
Dod01g2381 476 Coils Coil 187 207 - -
Dod01g2381 476 MobiDBLite consensus disorder prediction 1 45 - -
Dod01g2381 476 MobiDBLite consensus disorder prediction 253 300 - -
Dod01g2381 476 PANTHER SYNAPSE-ASSOCIATED PROTEIN 1 87 - -
Dod01g2381 476 MobiDBLite consensus disorder prediction 20 43 - -
Dod01g2381 476 PANTHER SYNAPSE-ASSOCIATED PROTEIN 87 470 - -
Dod01g2381 476 PANTHER PROTEIN, PUTATIVE-RELATED 1 87 - -
Dod01g2381 476 MobiDBLite consensus disorder prediction 342 384 - -
Dod01g2381 476 MobiDBLite consensus disorder prediction 253 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2381 Dod-Chr1 62378661 62386696 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2381 - - aip:107645366 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2381 01 62378661 62386696 Dod01g2381 01 62378661 62386696 ECH
Dod01g2381 01 62378661 62386696 Dod07g0508 07 6701805 6703253 PCT