Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2380 ATGAGAGGGATACAGTTACCGTTGAGCCAAACTCAGAAGGTTCGTCTCGAGAAGGCTCTGCAGCAGCTGGAGTCACTGTCCTCTAAGGTCAACTCCGACGCCTCCGTCGCCGTCGCCGATTCCATCTCCGTCAACCACGAAGACGGTGTCCTCAAGGGCCACGGCACCGTCGACCTCGACGGCGAACTCGTCGCCACCCTCTGCGGCGTCGTCGAGCGCGTCAACAAGCTCGTCTACGTCCGCGCCTTGCGCTCCAGGTACAAACCTGAGGTTGGGGACATCGTTGTTGGACGTGTTGTTGAGGTTTCTCAAAAGCGCTGGAGGTTGGAGATAAATTACAGTCAAGATGCTGTTTTGATGCTTTCTTCCATGAACATGCCTGATGGTGTCCAGAGGCGGCGAACTGCTGTGGATGAACTGAATATGCGTGCAATTTTTGAAGAGAAGGACATCGTTTGTGCTGAGGTTCGGGGTTTCCAGCATGATGGCTTACACCTACAGGCAAGAAGCCAGAAATATGGAAAGCTTAATAGAGGTCAGCTGCTTACAGTCCCACCCTATCTAGTGAAGAGACAAAAGCAACATTTTCATCATCTGGAGCAATATGGTATTGATTTGGTTCTTGGATGTAATGGATTCATATGGCTTGGGGAACATATTGAAGCCAAAGATGACATGGTAGAAGATCAAGTGAACCAATCTGATCCACAAGTTATATGGCCCAATAAAAATGCAGTGAGTCTTGAAGAACAAGAGAAGAATTATACAGCTTTGGAGACAAGAAAATACATATGCAGAGCTGCTAATGCTGTCAGAGTATTATCCACATTGGGTTTCAATATGACATTGGAAATCATCAAGGGAGTTATTGATCTAAGCCTTTCTTTGAATCTTGATATACACGATATGCTTGGTTCAGAATTCTGTGTTCTGGTTGCTGAAAGAGAGGCCGAAAGGAGAAGCTTAAATAAAAAGAAGAGATAG 984 0.4654 MRGIQLPLSQTQKVRLEKALQQLESLSSKVNSDASVAVADSISVNHEDGVLKGHGTVDLDGELVATLCGVVERVNKLVYVRALRSRYKPEVGDIVVGRVVEVSQKRWRLEINYSQDAVLMLSSMNMPDGVQRRRTAVDELNMRAIFEEKDIVCAEVRGFQHDGLHLQARSQKYGKLNRGQLLTVPPYLVKRQKQHFHHLEQYGIDLVLGCNGFIWLGEHIEAKDDMVEDQVNQSDPQVIWPNKNAVSLEEQEKNYTALETRKYICRAANAVRVLSTLGFNMTLEIIKGVIDLSLSLNLDIHDMLGSEFCVLVAEREAERRSLNKKKR* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2380 327 Pfam KH domain 179 219 IPR004088 GO:0003723
Dod01g2380 327 SUPERFAMILY Ribosomal L27 protein-like 44 82 - -
Dod01g2380 327 Coils Coil 13 33 - -
Dod01g2380 327 PANTHER PNAS-3 RELATED 10 320 IPR026699 GO:0000178|GO:0003723
Dod01g2380 327 Gene3D - 36 87 - -
Dod01g2380 327 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 179 321 IPR036612 GO:0003723
Dod01g2380 327 PANTHER EXOSOME COMPLEX COMPONENT RRP4 10 320 - -
Dod01g2380 327 SUPERFAMILY Nucleic acid-binding proteins 85 176 IPR012340 -
Dod01g2380 327 Gene3D - 88 177 IPR012340 -
Dod01g2380 327 CDD S1_Rrp4 86 176 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2380 K03679 - gmx:100776358 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2380 01 62372251 62374775 Dod01g2380 01 62372251 62374775 ECH