Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2378 ATGTTCAACCTCCTCAACAAGACCCTCCGCCGCCTCTGGCCCCGCCTACTCCGCTGGCCCAAACGTCGCCGTTTCAGGCCCAAACTCTACATCAAGAGGTTCGGAAAACCCACCACACCAAAAAGACAACCTCGAAACAAAACCACCACCACCACCACCATAACCAACTCCAACAACAACAACGGCTCATCAGCAATGGTTCACCCCAACAACAACACCACCACCCCAAAACCAAAACCAATACGAATAGCAACCTTCAACGCCGCACTCTTCTCCATGGCACCAGCACTTCCCGAAACACCAAAAACCGCCACCACCATTAGCAACGACCAAAACGGCAACAACAACAACAACAACAACGCTCTCAAACTCCATGCAAAGTCAGCGAACGACAGAAGACCCAAGAGCATCCTGAAGCATTCTCCTCTTCACCCAAGTTCCATGAATGTTCCAGAACCTCGCAACAACCTACCCAAGTCCAAGCTGAGAGTCTCCATCAACTTACCCGACAACGAGATTTCCTTGCTTCGAAGCAGACAATCGAGTTTCTCGGAACATGAAAAAGGGTATAACTGGAGGAACGTTGTGATGAGACAGAGCGTGAGTTTCTCTAGTTTCGAAGGGTATAATACTACTACTACTAATAATAATAATAATGGGAATGGTTATGATGATGTGTATGGAATTAGGAGCAACAGCAGAAGAACGGTGGTTGAGGTTCTGAGAGAGTTGGACGCTGACGTTTTGGGGTTGCAGGATGTGAAGGCAGAGGAAGAGAATGGGATGAAGCCTTTGTCTGATTTGGCAAAAGCATTGGGGATGAACTACGTCTTTGCTGAGAGCTGGGCTCCTGAATACGGCAACGCCGTCTTGTCCAGGTGGCCGATCAAGCGCTGGAATGTTCAGAAAGTCTTTGACGACACTGATTTCAGGAATGTTCTCAAGGCCACTATCGATGTACCCCAAGCAGGTGAACTGAACTTTTACTGTACCCACCTTGATCATCTCGATGAGAATTGGAGGATGAAGCAGATAAATGCAATAATCCAATCTAATGATGAGCCTCACATCTTAGCTGGAGGACTTAATTCACTTGATGAATCAGATTACTCCCAAGAAAGATGGACAGATATTGTAAAGTACTATGAAGAGATGGGAAAGCCAATACCAAAGGTTGAAGTGATGAAATATCTCAAGGGTAGAAACTACACTGATGCTAGGGACTTTGCTGGGGAATGTGAATCCGTTGTCATGATTGCCAAAGGCCAAAGTGTCCAAGGGACATGTAAGTATGGAACTCGGGTAGATTACATATTATCATCCTCAGATTCTCCATATAAGTTCGTTCCCGGGTCCTATCTAGTGCATTCTTCAAAAGGGACTTCAGATCATCACATAGTGAAAGTTGATGTGGTAAAAGTGAATAGCAATCCAACCAGTCCTCGAGAAAATATAACAAAGAAGCAGCAGCGGCAACCAAGACAGAAAGTTGCAAGAATAACACATTCAAGTCCATCAACATGTATATGGAAAACACACACACTAGAGATAGATTGA 1557 0.4534 MFNLLNKTLRRLWPRLLRWPKRRRFRPKLYIKRFGKPTTPKRQPRNKTTTTTTITNSNNNNGSSAMVHPNNNTTTPKPKPIRIATFNAALFSMAPALPETPKTATTISNDQNGNNNNNNNALKLHAKSANDRRPKSILKHSPLHPSSMNVPEPRNNLPKSKLRVSINLPDNEISLLRSRQSSFSEHEKGYNWRNVVMRQSVSFSSFEGYNTTTTNNNNNGNGYDDVYGIRSNSRRTVVEVLRELDADVLGLQDVKAEEENGMKPLSDLAKALGMNYVFAESWAPEYGNAVLSRWPIKRWNVQKVFDDTDFRNVLKATIDVPQAGELNFYCTHLDHLDENWRMKQINAIIQSNDEPHILAGGLNSLDESDYSQERWTDIVKYYEEMGKPIPKVEVMKYLKGRNYTDARDFAGECESVVMIAKGQSVQGTCKYGTRVDYILSSSDSPYKFVPGSYLVHSSKGTSDHHIVKVDVVKVNSNPTSPRENITKKQQRQPRQKVARITHSSPSTCIWKTHTLEID* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2378 518 MobiDBLite consensus disorder prediction 477 496 - -
Dod01g2378 518 Gene3D Endonuclease/exonuclease/phosphatase 211 473 IPR036691 -
Dod01g2378 518 MobiDBLite consensus disorder prediction 41 77 - -
Dod01g2378 518 Pfam Endonuclease/Exonuclease/phosphatase family 232 464 IPR005135 GO:0003824
Dod01g2378 518 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 1 513 - -
Dod01g2378 518 MobiDBLite consensus disorder prediction 35 77 - -
Dod01g2378 518 MobiDBLite consensus disorder prediction 100 125 - -
Dod01g2378 518 MobiDBLite consensus disorder prediction 100 157 - -
Dod01g2378 518 SUPERFAMILY DNase I-like 228 471 IPR036691 -
Dod01g2378 518 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 1 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2378 Dod-Chr1 62357782 62361527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2378 - - tcc:18613428 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2378 01 62357782 62361527 Dod01g2378 01 62357782 62361527 ECH
Dod01g2378 01 62357782 62361527 Dod07g0502 07 6586676 6592325 PCT