Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2377 ATGCAGCAGCACTCCAACTCCAACTCCAACACGAGAGACGACCAACTCATACAGAAGCTGCAAGACTCCACAAGGAACGCCCACCATCACCAGTTGGACACTCTCCGCTCCATCCTGAGCCACAATGGCAAAGTCCGCTATCTCCAACCCTTCCTCTCTCATCATTCTTCCTTATTCCAACCCCAAGGAAGGGGCTGCACTACTCTTCTTGAGGACCCTGCTGCCTTCAAAAGTGTGGTGCCCCTCTCTTCATACGAAGACTATGCTGACTACATCAACCAAATGGCAGATGGCAAAGGAAAACAGGACCACCCTCTTCTCTCTGTTGATCCTCTTCTCTGCTTCTTCCACAGCTCCGGAACAAGCTCTATGAAGCCGAAATTGATCCCTTATTTTGATTCAAGCCTTTCCAGAGATGCCTCCTTTATAGCTCACCAAGGCAGTGTTGCTGTTCTTCGGAGGTTGTTTCCTCCAAGGCCCGCAGTGAACAAGATCCTATGGTTTCTCTATGCAGACAAAATTACTACTACTAAAGGTGGCTTGAAGGTTATGGCTGCCTCTTCATACCCTTGGCAAAGTGGAAAGGCCACCCCTCAACGACTTGCTGTCTATTCCAGTCCTCCAGAAGTTATTCTTGGATCGCATGTTGAGCATCAAATGTATTGCCACCTTCTATGTGGCCTTAGGAATCTGGAAGTGATAGATGGGATCAGAACCCCTTATGCCATAGGCTTAGTTAAAGCATTTAGTCTTCTGGAGTCCAAGTGGGAGCAGCTATGTGATGACCTTAACTGTGGCTTCCCGAGTCATGAAATTTCAGAGGTGGCAATGAGGGAAGCTGTAACTAAGACACTTGGTGGGCCACAACCAGAATTGTCAAAAAGAATAAGGCTAATTTGTGAATCTGAAAACTGGAGTGGTCTTGTTTGTAAATTGTGGCCAAACATCCGTTATATCAGGTGTGTTAGCACTGGAAGCATGAAGCAGTACTACCCCAAGCTTAAGCATTATGCTGGAGATGTACCTATTTTAGGAGGAGATTACTTTGCCTCAGAGTGTTGTGTGGGAATAAATTTAGATATAATGCAACCGCCTGAGACCACGCGATCTGTAATAATTCCAACCGCAGCCTACTTTGAGTTTCTTCCATTTAGCATGAATGAGGGCAATGATGTTGCCGAAGAAACAGTGGACCTTAGCAATGTGGAGGTTGGGAAGATGTATGAAGTGATTGTCACCACTTATAGAGGATTTTATCGCTATCGTTTAGGCGATGTAGTGAGAGTTGTTGGTTTCTATAATTCATCACCGCAAGTGGAATATGTGATGAGAGCGCCTAAATCTACTGCTGAGATTCTAACCGAGAAAGACTTGATTTCAGCAGTTGAAAACTTTCAACTTGCACTAAGAGGTGCTACGAGAATTGAGATCATTGAGTTTGCAAGTTTCTTGGACCAGGAGTCAAGGCCAAAGCAGTTGAAGGTATTTGTAGAAGTCCAAGAGGAATCTAACTTTCAGGAGTCTGTTCTCATTTTTAAAAGGTGTATTTCCTCACTAGAGGGTGGCTTGGGAGCTTTGTACAAGGCGCAGAGGGATAAAGGTCACGTAGGGAACTTATTGATACTGGTCCTAAGGGCTGGAGCTTTTGATCAGTTATCAGAATTGGCCATTAAAAATGGAACACCAGCTAGTCAATATAAACCACCCAAGATTATAAGGAATCATGAAATTGTCAAATTCCTGGAAAAATTAGCTGCTGTGACAGTATCTTTGGATGGCTAA 1782 0.445 MQQHSNSNSNTRDDQLIQKLQDSTRNAHHHQLDTLRSILSHNGKVRYLQPFLSHHSSLFQPQGRGCTTLLEDPAAFKSVVPLSSYEDYADYINQMADGKGKQDHPLLSVDPLLCFFHSSGTSSMKPKLIPYFDSSLSRDASFIAHQGSVAVLRRLFPPRPAVNKILWFLYADKITTTKGGLKVMAASSYPWQSGKATPQRLAVYSSPPEVILGSHVEHQMYCHLLCGLRNLEVIDGIRTPYAIGLVKAFSLLESKWEQLCDDLNCGFPSHEISEVAMREAVTKTLGGPQPELSKRIRLICESENWSGLVCKLWPNIRYIRCVSTGSMKQYYPKLKHYAGDVPILGGDYFASECCVGINLDIMQPPETTRSVIIPTAAYFEFLPFSMNEGNDVAEETVDLSNVEVGKMYEVIVTTYRGFYRYRLGDVVRVVGFYNSSPQVEYVMRAPKSTAEILTEKDLISAVENFQLALRGATRIEIIEFASFLDQESRPKQLKVFVEVQEESNFQESVLIFKRCISSLEGGLGALYKAQRDKGHVGNLLILVLRAGAFDQLSELAIKNGTPASQYKPPKIIRNHEIVKFLEKLAAVTVSLDG* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2377 593 Pfam GH3 auxin-responsive promoter 20 575 IPR004993 -
Dod01g2377 593 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.6-RELATED 12 589 - -
Dod01g2377 593 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 12 589 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2377 Dod-Chr1 62347866 62351064 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2377 17 588 EF-hand Containing Proteins AT1G23160 31.516 6.26e-89 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2377 K14487 - gmx:100786829 875.93