LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod01g2373	ATGGGGATCAAAGAGGATGTGGAGGGTGGTGGTTTGCAGCAAGGAGTCAGAGAGCCACTGGTTCCTGAACACAACAACGACCATGCAAGCAAGGGGCATCCATGGATGGTTTACTTCACTACATTCGTTGCAGTCTGTGGTTCCTATGAATTTGGAGCATGTGCTGGTTATTCTTCTCCCACTCAAAATGCTATCAGGAACGATCTGGGTCTGACTTTGGCAGAGTATTCTTTGTTTGGCTCCATCTTGACTTTCGGTGCGATGATTGGCGCTATTACTAGTGGGCCTATTGCTGATTTGATTGGACGAAAAGGGACAATGAGGCTGTCAAGTGCCTGCTGTGTTGCAGGGTGGCTTGTTATTTTCTTTTCTGAGGGCCCAGTACCTCTGGACATTGGGAGGCTAGCAACAGGATATGGAATGGGAGTTTTCTCTTATGTGGTTCCTGTCTTCATAGCTGAAATTGCACCAAAAGAACTGAGAGGCGCACTTACTACCCTAAACCAGTTCATGATCTGTGGTGCAGTGTCTGTGTCATTTGTGATTGGAAATGTACTTTCCTGGAGGGCTTTAGCTTTGATTGGCCTCATTCCCACTGCCGTGTTGCTTTTGGGTCTGTTTTTCATTCCGGAATCTCCTAGATGGCTGGCAAAGAGAGGATGCGGAAAAGATTTTGAGGCAGCACTGCAGATACTTCGCGGCAAAGATGCTGATATATCTCAAGAGGCAGATGAAATTCAGGACTATATAACTACTTTAGAACGGCTCCCTAAACCCAAGCTGCTGGAATTGTTTGAAAGAAGATATTTGCGCTCAATCACTATAGGAATAGGGCTTATGGTCTGCCAGCAGTTTGGGGGAATCAATGGAATTTGTTTTTATACCAGCAGTATTTTTGAGCTGGCAGGTACTTACTTTGATAATTGCTTTTTGCAGATTGTGATCACAGGCCTTGGTGCAGCCCTGATAGATAAAGTTGGCAGGAAGCCCCTATTACTGGTATCTGGGCATGGAGTGGTCGCAGGTTGTCTATGTACAGCAGTAGCATTCTACCTTAAGGTTCACGAGGTAGGTTTGGAAGCAGTTCCAGCACTTGCTTTGACTGGCATACTGGTCTACATAGGATCATTTTCAGTAGGAATGGGAGCAATTCCATGGGTTGTGATGTCTGAGGTACTTGAGAACCACCAATGTTGA	1197	0.4578	MGIKEDVEGGGLQQGVREPLVPEHNNDHASKGHPWMVYFTTFVAVCGSYEFGACAGYSSPTQNAIRNDLGLTLAEYSLFGSILTFGAMIGAITSGPIADLIGRKGTMRLSSACCVAGWLVIFFSEGPVPLDIGRLATGYGMGVFSYVVPVFIAEIAPKELRGALTTLNQFMICGAVSVSFVIGNVLSWRALALIGLIPTAVLLLGLFFIPESPRWLAKRGCGKDFEAALQILRGKDADISQEADEIQDYITTLERLPKPKLLELFERRYLRSITIGIGLMVCQQFGGINGICFYTSSIFELAGTYFDNCFLQIVITGLGAALIDKVGRKPLLLVSGHGVVAGCLCTAVAFYLKVHEVGLEAVPALALTGILVYIGSFSVGMGAIPWVVMSEVLENHQC*	399

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod01g2373	398	ProSitePatterns	Sugar transport proteins signature 1.	319	336	IPR005829	GO:0016021\|GO:0022857\|GO:0055085
	Dod01g2373	398	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	36	398	IPR020846	GO:0022857
	Dod01g2373	398	MobiDBLite	consensus disorder prediction	1	25	-	-
	Dod01g2373	398	Gene3D	MFS general substrate transporter like domains	28	397	IPR036259	-
	Dod01g2373	398	Pfam	Sugar (and other) transporter	48	395	IPR005828	GO:0016021\|GO:0022857\|GO:0055085
	Dod01g2373	398	PANTHER	-	33	393	-	-
	Dod01g2373	398	SUPERFAMILY	MFS general substrate transporter	23	393	IPR036259	-
	Dod01g2373	398	CDD	MFS_GLUT6_8_Class3_like	38	393	IPR044775	GO:0008643\|GO:0051119
	Dod01g2373	398	ProSitePatterns	Sugar transport proteins signature 1.	94	111	IPR005829	GO:0016021\|GO:0022857\|GO:0055085
	Dod01g2373	398	PANTHER	SUGAR TRANSPORTER ERD6-LIKE 7	33	393	-	-
	Dod01g2373	398	PRINTS	Sugar transporter signature	367	388	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Dod01g2373	398	PRINTS	Sugar transporter signature	283	293	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Dod01g2373	398	PRINTS	Sugar transporter signature	131	150	IPR003663	GO:0016020\|GO:0022857\|GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod01g2373	Dod-Chr1	62332668	62336359	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod01g2373	13	372	Organic Solute Cotransporters	AT2G48020	69.041	0.0	508

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod01g2373	K03444		-	gmx:100785248	639.417

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod01g2373	01	62332668	62336359	Dod01g2373	01	62332668	62336359	ECH