Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2345 ATGGAGGACGAAGAAGACCAGCAGAAGCTTCCAGATCTGGTGAAGGAACTCGTCCTCCGCCTCCTCTCCCCCAACGACGACGACCACCAACACTCCCCAAAACCAAACCCTAACTCCCCCGAGTTCCGCAACTCCCTCCGCTACGCCTCCCGCATCCTGTCGAGCCGCCTGTTCCCCTCCGTGGCCCCCGACGCCGCCGCCATCGCCGACTCCATCAAGCGCCGCCTCGCCTCCCACGGCACCTCCTCCCTCGCCCTCTCCTTCGCCGACCTCTTCGCCAAGTTCTCCTCCAAAACCGGCCCCGGCAGCGTCAACAACAAGTGGGCCGTCATCTACCTCCTCGACATCATCTCCCACGACCGCCGCAATGCCAAATCCCTATCTTGCCCTCCCTCCCTCTTGCCCAATTTGCCCCTCCCCGATAACAACGATTCAGGTAAGGGTTGGGATAACGGTGTTTTGCTTCTTTCTAAGGATCCCGAGAATCGACGCGATTTAGCGTTCAGGGAGTTCGTGAATTTGATTAGGGAAGAGAATGAGGTCTCTGAAGAGGTTTTGGTTAGGGATGTTTTGTATGCTTCTCAAGGTGTTGATGGGAAGTGCGTCAAATTCGAGGGTAACGATGTTGGGTATTTGTTATTGGATTCGATTAGGGTCCCTAGAGCTACTAGGATTATGGTTCAGAAGCTTTGTGAATTGGGGAGGTTGTTTAGGATTGTTACGGGGTTTATATCTCAGAGTATGGATCGGTTTCCGGCTGAAGATGTTGGCACTGTTGGCCAGGCTCTTTGTTCTGCATTGCAGGATGAGCTTACTGAGTATTATAAGCTCTTGGCTGTGCTTGAGGCTCAGTCTTCGAATCCGATTCCTTTGGTGTCCGAATCGGCAAGCTCGGGGAATTACCTTTCCCTTAGGAGATTGGCTGTTTGGCTTGCAGAGCCGACGGTGAAGATGAGGTTGATGGCTGATTTGGTTGACAAGTGCAGGGTTTTGAGGGGCGGCGCGATGGCTGGCGCGATTCATTTGCATGCGCGGCATGGTGATCCCCTTGTTCATGAGTTCATGAAGAGGTTGCTGCAGAGAGTATGTTCTCCCCTGTTTGAGATGGTGAGGAGGTGGGTTCTAGAGGGGGAGTTGGAAGATATCTTTGCCGAGTTTTTTATTGTGGGTCAGGAGGTGAAAGCTGAGTCCCTCTGGAGAGAGGGTTACAGGCTCCACGATGCGATGCTTCCTTCATTCATTTCGCCTTCACTTGCTCAGCGGATCTTGAGGACTGGGAAGTCCATAAATTTCCTACGGGTTTGTTGTGAGGATCGGGGTTGGGCTGATGCAGCAACAGAAGTCGCCACTGATACAGGGGCTGCTGCTAGAAGAGGTGGCTTTGGGTATGGGGAAACTGATACCCTTGAGTCCTTGGTGGATGAAGCTGCTAAAAGAATTGATAAGCATCTGTTGGATGTAATCTACAGGAGGTACAAATTCAAGGAGCACTGTCTTGCAATCAAGCGGTATTTATTGCTTGGTCAAGGTGATTTTGTGCAATATCTAATGGATATTGTCGGGCCTGAGCTTTCTGAGCCAGCGAACACTATAAGCTCTTTCAAACTCTCTGGATTGCTGGAAACTGCAATTCGGGCATCCAATGCCCAATATGATGATCCTGACATTTTGGATAGGCTCAGGGTCAAGATGATGCCTCATGAAAGTGGTGATAGGGGCTGGGATGTGTTTTCACTAGAATATGATGCAAGAGTCCCACTAGATACTGTGTTCACGGAGTCTGTGATGGCAAAGTATTTAAGGATTTTTAATTTTCTGTGGAAGCTTAGAAGAGTGGAACATGCACTCATTGGTGCCTGGAAGACCCTGAAACCAAACAGTATCACTTCTCATTCCTTTACCAGATTGCAAAATGCAGTAAAGATGCAGTTAGTTTCAACATTGAGGCGCTGCCAAGTCTTATGGGTTGAAATAAATCACTTTATTTCAAACTTACAATATTACATAATGTTTGAAGTCTTGGAGGTATCATGGTCGGACTTTGTAAGTGAGATGGATGCAGCCAAGGATCTTGATGACCTACTTGTAGCTCATGATAAATATTTGGATTCCATTGTGGAGAAATCCCTACTTGGAGAGCTTTCCCAGTCGCTTTACAAGTCACTATTTGTGATATTTGACCTTATACTACGTTTTCGGAGCCATGCAGATCGCCTGTATGAAGGTATTCACGAGCTGCAATCAAGAATCACAGGCTCCTCCCTATCCTCTCAAGACCAGAATAAATCACGAAAGCAAATGATTGATAAGTCTGTGGAACAAGGATCCTGGATTGCTGATGGGAGGAAAGCCCTGACACAACGTGCTGGTGAATTTCTTCGAAATATGGGACAAGATCTGGATGGGATTGCTAAGGAGTATTCATCATTGCAAGAGGAATTCATCTCTCAGTTGCCTGTACAGCAGCATGTTGATCTGAAATTTCTCTTTTTCCGTCTCGACTTCAATGAATTTTATAGGCGGGTGTCTCCCAGCATATAG 2541 0.4821 MEDEEDQQKLPDLVKELVLRLLSPNDDDHQHSPKPNPNSPEFRNSLRYASRILSSRLFPSVAPDAAAIADSIKRRLASHGTSSLALSFADLFAKFSSKTGPGSVNNKWAVIYLLDIISHDRRNAKSLSCPPSLLPNLPLPDNNDSGKGWDNGVLLLSKDPENRRDLAFREFVNLIREENEVSEEVLVRDVLYASQGVDGKCVKFEGNDVGYLLLDSIRVPRATRIMVQKLCELGRLFRIVTGFISQSMDRFPAEDVGTVGQALCSALQDELTEYYKLLAVLEAQSSNPIPLVSESASSGNYLSLRRLAVWLAEPTVKMRLMADLVDKCRVLRGGAMAGAIHLHARHGDPLVHEFMKRLLQRVCSPLFEMVRRWVLEGELEDIFAEFFIVGQEVKAESLWREGYRLHDAMLPSFISPSLAQRILRTGKSINFLRVCCEDRGWADAATEVATDTGAAARRGGFGYGETDTLESLVDEAAKRIDKHLLDVIYRRYKFKEHCLAIKRYLLLGQGDFVQYLMDIVGPELSEPANTISSFKLSGLLETAIRASNAQYDDPDILDRLRVKMMPHESGDRGWDVFSLEYDARVPLDTVFTESVMAKYLRIFNFLWKLRRVEHALIGAWKTLKPNSITSHSFTRLQNAVKMQLVSTLRRCQVLWVEINHFISNLQYYIMFEVLEVSWSDFVSEMDAAKDLDDLLVAHDKYLDSIVEKSLLGELSQSLYKSLFVIFDLILRFRSHADRLYEGIHELQSRITGSSLSSQDQNKSRKQMIDKSVEQGSWIADGRKALTQRAGEFLRNMGQDLDGIAKEYSSLQEEFISQLPVQQHVDLKFLFFRLDFNEFYRRVSPSI* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2345 846 Coils Coil 793 813 - -
Dod01g2345 846 Coils Coil 264 284 - -
Dod01g2345 846 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 34 124 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Dod01g2345 846 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 145 834 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Dod01g2345 846 Gene3D - 495 838 IPR042241 -
Dod01g2345 846 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 34 124 - -
Dod01g2345 846 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 145 834 - -
Dod01g2345 846 Pfam Gamma tubulin complex component C-terminal 496 839 IPR040457 GO:0043015
Dod01g2345 846 Pfam Gamma tubulin complex component N-terminal 187 488 IPR041470 -
Dod01g2345 846 MobiDBLite consensus disorder prediction 24 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2345 Dod-Chr1 61719440 61723122 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2345 K16570 - gmx:100784710 1379.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2345 01 61719440 61723122 Dod01g2345 01 61719440 61723122 ECH