Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2342 ATGTCGGTTATAGGCGCATACTCGCATATTCTCTATGGAGATGTTTACCAGAGAGATCAACAGCACCAGCACCAGCACCAGCACCACCAGTGCTATGTAAGTGGAGGGGGCTACTTGTTTCCGTTGATCAAGAGTAGTTGTGGGAACGTATGGATTGGGCGCAGAAACATTGAGCGCAAGATTAATAGACGGGGGGATTTGAGGGTGGAAGCGATGTGGCCAGATTTGTCAAGACCAAGTGTGGTAGAGATGGAACCCATCAATGATAGTGAGCAACTGGATCAAATTCTACTTCTTGCTCAACAGAACTCCCAGCCCATCCTCATTGATTGGATGGCTGCTTGGTGCCGGAAATGCATATATTTGAAGCCCAAGTTGGAAAAATTGGCTGCTGAATATGACACCAAAATCAAATTCTATTGCGTGGATGTCAATCAAGTACCTCAGTCTCTAGTCAAGCGTAGCAATATCTCTAAAATGCCAACAATTCAGCTGTGGAAAGATGGGGAGATGAAAGCAGAAGTCATTGGAGGCCACAAGGCCTGGCTAGTCATTGAAGAAGTCAGAGAAATGATCGAAAAGTTTGTATAG 591 0.4535 MSVIGAYSHILYGDVYQRDQQHQHQHQHHQCYVSGGGYLFPLIKSSCGNVWIGRRNIERKINRRGDLRVEAMWPDLSRPSVVEMEPINDSEQLDQILLLAQQNSQPILIDWMAAWCRKCIYLKPKLEKLAAEYDTKIKFYCVDVNQVPQSLVKRSNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIEKFV* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2342 196 Pfam Thioredoxin 101 181 IPR013766 -
Dod01g2342 196 PANTHER THIOREDOXIN-LIKE 3-1, CHLOROPLASTIC 1 196 - -
Dod01g2342 196 CDD TRX_family 91 193 - -
Dod01g2342 196 SUPERFAMILY Thioredoxin-like 83 193 IPR036249 -
Dod01g2342 196 Gene3D Glutaredoxin 77 195 - -
Dod01g2342 196 PANTHER THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC 1 196 IPR044253 GO:0009570
Dod01g2342 196 ProSiteProfiles Thioredoxin domain profile. 67 196 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2342 Dod-Chr1 61700899 61703183 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2342 - - gmx:100783648 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2342 01 61700899 61703183 Dod01g2342 01 61700899 61703183 ECH