Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2301 ATGGCAACAACCACCACAGTGCTGCTCCGCGTGTCCCTACTACTGGTTCTGCTGTCCCCAGTAGTACTCTCTGCACGGAAGCGGTGCAACCCAGAGGACAAGAAAGTGCTTCTCCAAATCAAGAAGGACCTCAACAACCCTTACGTCCTCGCCTCCTGGGACCCAAAAACTGATTGCTGCGGATGGTACTGCGTCGAGTGCGACGAGAAAACCAACCGCATCATCACCTTCGGCATTTACCTTTCTGTCCCTGAGACCAATTTCTCGGCCCAGATCCCACCCTCCGTGGGCCTACTCCCTTACCTTCAAACCCTCGAGCTCCACCACCTCCCTTACCTCACGGGCCCGCTCCAGCCCGCAATCGCCAAGCTCACTAACCTCCAGTTCATCCGCATCAGCAGGACCAACATCTCGGGCCCGGTCCCCCCTTTCCTGGCCCGCCTCAAAAACCTCACGTTCCTCGACCTCTCATTTAACAACTTCACGGGTTCGATCCCTGGTGAGCTCTCCCAGCTGCCAAAACTCGAGGCCCTTCACTTGGACCGGAACCACTTAACCGGGCCCATCCCTCCCTCGTTCGGGTCTTTCAAGTCCAACCCGGATATCTACCTCTCTCATAACAACCTCTCCGGGCCCATCCCTCCTTCACTTTTTAACCTCAACATTACGCGGTTGGACCTGTCGCGGAACAAGCTCGAGGGCGACGCGTCTGGGGTTTTCGGGCCCAACAAGGGGACGGAGACGGTGGACCTTTCGAGGAACCAGTTTGCGTTCGATGTGAGCAAGTTGAAGTTCTCGCCGAACATGATTTACTTGGATCTGAACCACAACAAGTTGTACGGTAGCCTTCCCAATGGGCTGACCGCACTAGATCTGCAGTTCTTTAACGTGAGCTACAACAGGCTTTGCGGTCAGATTCCCCAAGGTGGGAGGCTGCAGGAGCAGGATATTTACTCTTATTTCCATAACAAGTGCCTCTGTGGGTCTCCACTTCCCAGCTGCAACTGA 1008 0.5536 MATTTTVLLRVSLLLVLLSPVVLSARKRCNPEDKKVLLQIKKDLNNPYVLASWDPKTDCCGWYCVECDEKTNRIITFGIYLSVPETNFSAQIPPSVGLLPYLQTLELHHLPYLTGPLQPAIAKLTNLQFIRISRTNISGPVPPFLARLKNLTFLDLSFNNFTGSIPGELSQLPKLEALHLDRNHLTGPIPPSFGSFKSNPDIYLSHNNLSGPIPPSLFNLNITRLDLSRNKLEGDASGVFGPNKGTETVDLSRNQFAFDVSKLKFSPNMIYLDLNHNKLYGSLPNGLTALDLQFFNVSYNRLCGQIPQGGRLQEQDIYSYFHNKCLCGSPLPSCN* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2301 335 SUPERFAMILY L domain-like 28 333 - -
Dod01g2301 335 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Dod01g2301 335 Pfam Leucine rich repeat 126 185 IPR001611 GO:0005515
Dod01g2301 335 PANTHER POLYGALACTURONASE INHIBITOR 1 13 334 - -
Dod01g2301 335 Gene3D Ribonuclease Inhibitor 28 335 IPR032675 -
Dod01g2301 335 PANTHER POLYGALACTURONASE INHIBITOR 2 13 334 - -
Dod01g2301 335 ProSiteProfiles Leucine-rich repeat profile. 150 172 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2301 Dod-Chr1 61030793 61031800 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2301 81 331 Receptor kinase-like Gene Family AT2G15080 26.821 1.10e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2301 - - aprc:113862147 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2301 01 61030793 61031800 Dod01g2301 01 61030793 61031800 ECH